Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1116 ATGGCGCTGATGAGCTCCAGTACTGTTGGTGGTTCTTGCTCCACCGTGGCGGCTCGATTGAACTATCACGTTTTCTTGAGCTTCAGAGGAGAAGACACTCGCAGAAACTTCACCGACCACCTGTACGCTGCGTTGCAGCGAAAAGGGATTGTCACTTTCAGGGACGACCAAGCTCTTGAGGGATCAGGACAGGTTATTTCGGAGAATCTCATGAAAGCTATTGAGGAATCTCTGTTTGCCATTGTCGTTCTGTCCCAAGACTATGCATTCTCGTCTTGGTGTTTGGATGAACTGCACAAGATTGTTGAATCCAAAGAAAACTTGACAGTTTTCCCGGTTTTTTATGGCGTAGATCCGTCTGATGTGCGACACCAAAAGGGAATTATTAGGAAAGCTTTTGAGAAACATGAAGGGAAATTTCCACTTTGTAAGGTGAGAAGATGGAGAAGAGCTTTAACACAAGTTGCAAACTTCGCTGGTTGGGATGCTAGAAACAAGCATGAAGCAGGAATCGTAAAAAATATTGCTGAAACAATATGGACCAAATTGCGTGTTAAATTGCCTTCAAATTTTGCTCATTTAGTTGGACTTCAATCAAAGGTAGACACAATGGTCTCTCTTTTGAAGATAGGGCTGAATCATAAATGTTTTGTAGGAATATGGGGTATGGGCGGAATAGGCAAAACGACTCTTTCTAGAGTTGTTTATGAAACAATCCGAGACAAATTTGAAATTAGTTGCTTTCTTGCCAATGTAAGGGAGGATTCAGAACGTAATGGTCTGGTTTACTTGCAAAAGAAGTTTCTCTCTGGTCTTCAATTAGAAAACATTAAAATCAGTGACTCCCATGATGGAGTTGAGGCGATAAGAAGCTTTTCACGTGATAAAAAAGTTCTTATTGTTCTTGATGATGTAAGTCATATAAGCCAACTACAGAATTTAGTTGGAGATAAAGATTGGTTTGGTGCTGGAAGCAGAATAATAGTAACTACGAGAGATATACACTTGTTGATAGCACATGATCAGTTTGAGAAGTATGAAATGAAGATGTTAGGAAGAGGTGAATCCCTCAATCTCTTGTGTAAGCATGCCTTCAAAATGGATTATCCTCAACAAGGTTATTGGGAATTGTCCAAAACGGTGGTTGATTATGCAGGTGGTCTTCCTTTAGCACTCCAAGTGTTAGGCTCGTTTCTTTGTAAAAGAAGTCAATCTGAATGGAGAGACACATTGGATAAGTTAAAGCAAAATTTACATAAAGATATTTTCAAGACACTTCGCATAAGTTATGATGGGCTAGATGATAAAGAGTTGAAAACAATATTCTTAGACATCGCATGCTTCTTTAATTGGGAGAAAAAAGTTGAAGTGATTAAAATATTTGAAAATTGTGGTCTTCATCCAACAATTGGAATCCAAGTTCTAATTGAAAAATCATTGTTGAGTACTTGCATTTCATTGGATGGCCAAGAACATGTATACATGCATGATTTTCTTCAAGAGATGGGAAAAAACATTGTTTTGCAAGAATCTCTGAGTGATGCTGGCAGACGCAGTAGGTCGTGGTCTTGGGAGCAGATTGATCAAGTCTTTAGGGGGAATACAGGAAGCAAAAGTGTTCAAAGTATAGTTTTGAACCTAAAGCAACAATTTGAAGCAAATTGGCACCCAAATTGCTTCTCAAAGATGAGTAATCTTAGATTATTCTGCTTAAGTAATGTTCATCTTTTGCATGGTCTCGATTCTCTTCCTACTACACTAAAAGTTCTCAAATGGGAGAAATATCCTTTGGAAACTCTACCACGCAATATTGACCAACTATATCAACTTGTGGACCTTACCTTACATCGTAGTAGAATCAAGGAACTTTGGAATGGAAGACCGTTTTTAGGAATGTTGAAGTTCATGGACTTGAGTTTTTCCAAGGAGCTAACTGAAACTCCAGATTTCAAAGGAGTTCCAAACCTTGAAAGATTGTTTCTTGAACACTGCATAAAACTAGTTAAGGTTCATGGGTCTCTCGGGAAGCTCAAGAACCTCGTTAAGTTGAGTTTGAGAGGTTGCCAAAATCTTGTGATCCTTCCCAGGAAATTGGAATTAAATTCTCTGGCGGAGTTTTCTCTCTATGGTTGCTCAAAGCTTGAAAAGCTTCCTGAATTTGGAGAAAACATGAATTGTCTCTCCATCTTTGATCTGAGTGGAACTAACATAAGAAAAGTTCCCTCTTCCATTGTTCATTTGACAAATCTTAAGGAGCTATATCTCCATGGATGCAACTGGCAAGCTTGGAATTCATGGAGTTTTTTTGGCTACTTTGGTCATTTGATAGGTCGGTTTCTGGGGAATCCAGTATCCAAGGGATTGAAGCTTCCCAATTCTTTCTCGGGCCTTTCTTCATTAAGAAAACTGGATTTGAGTTTTAGCAATCTGTACGATGGAGCAATCCCTAATGACTTAAGCGGCTTATCATCATTGATGGATTTTAATCTGAGGGGAAACAATTTTACTTCCTTACCTGTTGGCTGCATCTCCAATCTTGTTAACCTTGAGCAATTTGACTTGAGTAATTGTGTTCAGCTTCAGTCATTCCCTCAGCTTCCACCTAATTTAATTAGAGTATATGCTGGTTGCTGCCCTTCTATTGAACCCTTATTGGACATGCAACATCTCTTGGAATCACTACTTATCTATAAGACATGTAGTCTTCTCCTACATGGAGTCATTTTTCTGCATATTTCAGGAGATAAGATCCCAATTACAGTGTTTAAAGAGCAACAATGTCACATTGATCCATTTGGAGCAAGTGTATCTATAATAGTAGATAACCCTAATTTTTCCTATGAGAGTGAATTGTGGGGAATTGCTGTGTGCCTGGTGGTAAAAAGCAAGAAGGCTTTATATTACTGCTCAAGATCCAAATTTTATTGGAGATTCAGAGCTCTTGAAGAAGATAAAAGCTTGGAGGAACCACATCATGTATTTTATGTGGGAAAAGCATATTCAATCCCTCATCTTTACATAGCATTTTTTCCTTTGATCAATACTCACAAGTTTTGGCGACATTGCCGCCAACTTGAATTGCAAATTGAGGTTGAAAAAGAGTTTAGCATCAACGATTGTGGTTGGCGTCTTATGTGCAAGAAAGATTTTTGA 3153 0.3857 MALMSSSTVGGSCSTVAARLNYHVFLSFRGEDTRRNFTDHLYAALQRKGIVTFRDDQALEGSGQVISENLMKAIEESLFAIVVLSQDYAFSSWCLDELHKIVESKENLTVFPVFYGVDPSDVRHQKGIIRKAFEKHEGKFPLCKVRRWRRALTQVANFAGWDARNKHEAGIVKNIAETIWTKLRVKLPSNFAHLVGLQSKVDTMVSLLKIGLNHKCFVGIWGMGGIGKTTLSRVVYETIRDKFEISCFLANVREDSERNGLVYLQKKFLSGLQLENIKISDSHDGVEAIRSFSRDKKVLIVLDDVSHISQLQNLVGDKDWFGAGSRIIVTTRDIHLLIAHDQFEKYEMKMLGRGESLNLLCKHAFKMDYPQQGYWELSKTVVDYAGGLPLALQVLGSFLCKRSQSEWRDTLDKLKQNLHKDIFKTLRISYDGLDDKELKTIFLDIACFFNWEKKVEVIKIFENCGLHPTIGIQVLIEKSLLSTCISLDGQEHVYMHDFLQEMGKNIVLQESLSDAGRRSRSWSWEQIDQVFRGNTGSKSVQSIVLNLKQQFEANWHPNCFSKMSNLRLFCLSNVHLLHGLDSLPTTLKVLKWEKYPLETLPRNIDQLYQLVDLTLHRSRIKELWNGRPFLGMLKFMDLSFSKELTETPDFKGVPNLERLFLEHCIKLVKVHGSLGKLKNLVKLSLRGCQNLVILPRKLELNSLAEFSLYGCSKLEKLPEFGENMNCLSIFDLSGTNIRKVPSSIVHLTNLKELYLHGCNWQAWNSWSFFGYFGHLIGRFLGNPVSKGLKLPNSFSGLSSLRKLDLSFSNLYDGAIPNDLSGLSSLMDFNLRGNNFTSLPVGCISNLVNLEQFDLSNCVQLQSFPQLPPNLIRVYAGCCPSIEPLLDMQHLLESLLIYKTCSLLLHGVIFLHISGDKIPITVFKEQQCHIDPFGASVSIIVDNPNFSYESELWGIAVCLVVKSKKALYYCSRSKFYWRFRALEEDKSLEEPHHVFYVGKAYSIPHLYIAFFPLINTHKFWRHCRQLELQIEVEKEFSINDCGWRLMCKKDF 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1116 1050 Pfam TIR domain 21 193 IPR000157 GO:0007165
Prci8g1116 1050 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 759 IPR044974 GO:0006952
Prci8g1116 1050 SMART till_3 21 158 IPR000157 GO:0007165
Prci8g1116 1050 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 445 IPR027417 -
Prci8g1116 1050 Gene3D Ribonuclease Inhibitor 538 719 IPR032675 -
Prci8g1116 1050 Pfam NB-ARC domain 213 428 IPR002182 GO:0043531
Prci8g1116 1050 PRINTS Disease resistance protein signature 675 691 - -
Prci8g1116 1050 PRINTS Disease resistance protein signature 292 306 - -
Prci8g1116 1050 PRINTS Disease resistance protein signature 385 399 - -
Prci8g1116 1050 PRINTS Disease resistance protein signature 217 232 - -
Prci8g1116 1050 SUPERFAMILY L domain-like 544 883 - -
Prci8g1116 1050 FunFam Disease resistance protein (TIR-NBS-LRR class) 353 434 - -
Prci8g1116 1050 Gene3D - 185 345 IPR027417 -
Prci8g1116 1050 FunFam Disease resistance protein (TIR-NBS-LRR class) 18 185 - -
Prci8g1116 1050 Gene3D - 19 184 IPR035897 -
Prci8g1116 1050 Gene3D Ribonuclease Inhibitor 723 895 IPR032675 -
Prci8g1116 1050 SUPERFAMILY "Winged helix" DNA-binding domain 421 531 IPR036390 -
Prci8g1116 1050 Gene3D - 351 434 IPR042197 -
Prci8g1116 1050 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 161 IPR035897 -
Prci8g1116 1050 ProSiteProfiles TIR domain profile. 20 187 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1116 Prci-Chr8 7454898 7460078 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1116 21 825 WRKY Transcription Factor Family AT4G12020 31.884 2.37e-91 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1116 - - pcin:129318799 2135.53