Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1115 ATGGCGCTGATGAGCTCCAGTACTGTTGGTGGTTCTTGCTCCACCGTGGCGGCTCGATTGAACTATCACGTTTTCTTGAGCTTCAGAGGAGAAGACACTCGCAGAAACTTCACCGACCACCTGTACGCTGCGTTGCAGCGAAAAGGGATTGTCACTTTCAGGGACGACCAAGCTCTTGAGGGATCAGGACAGGTTATTTCGGAGAATCTCATGAAAGCTATTGAGGAATCTCTGTTTGCCATTGTCGTTCTGTCCCAAGACTATGCATTCTCGTCTTGGTGTTTGGATGAACTGCACAAGATTGTTGAATCCAAAGAAAACTTGACAGTTTTCCCGGTTTTTTATGGCGTAGATCCGTCTGATGTGCGACACCAAAAGGGAATTATTAGGAAAGCTTTTGAGAAACATGAAGGGAAATTTCCACTTTGTAAGGTGAGAAGATGGAGAAGAGCTTTAACACAAGTTGCAAACTTCGCTGGTTGGGATGCTAGAAACAAGCATGAAGCAGGAATCGTAAAAAATATTGCTGAAACAATATGGACCAAATTGCGTGTTAAATTGCCTTCAAATTTTGCTCATTTAGTTGGACTTCAATCAAAGGTAGACACAATGGTCTCTCTTTTGAAGATAGGGCTGAATCATAAATGTTTTGTAGGAATATGGGGTATGGGCGGAATAGGCAAAACGACTCTTTCTAGAGTTGTTTATGAAACAATCCGAGACAAATTTGAAATTAGTTGCTTTCTTGCCAATGTAAGGGAGGATTCAGAACGTAATGGTCTGGTTTACTTGCAAAAGAAGTTTCTCTCTGGTCTTCAATTAGAAAACATTAAAATCAGTGACTCCCATGATGGAGTTGAGGCGATAAGAAGCTTTTCACGTGATAAAAAAGTTCTTATTGTTCTTGATGATGTAAGTCATATAAGCCAACTACAGAATTTAGTTGGAGATAAAGATTGGTTTGGTGCTGGAAGCAGAATAATAGTAACTACGAGAGATATACACTTGTTGATAGCACATGATCAGTTTGAGAAGTATGAAATGAAGATGTTAGGAAGAGGTGAATCCCTCAATCTCTTGTGTAAGCATGCCTTCAAAATGGATTATCCTCAACAAGGTTATTGGGAATTGTCCAAAACGGTGGTTGATTATGCAGGTGGTCTTCCTTTAGCACTCCAAGTGTTAGGCTCGTTTCTTTGTAAAAGAAGTCAATCTGAATGGAGAGACACATTGGATAAGTTAAAGCAAAATTTACATAAAGATATTTTCAAGACACTTCGCATAAGTTATGATGGGCTAGATGATAAAGAGTTGAAAACAATATTCTTAGACATCGCATGCTTCTTTAATTGGGAGAAAAAAGTTGAAGTGATTAAAATATTTGAAAATTGTGGTCTTCATCCAACAATTGGAATCCAAGTTCTAATTGAAAAATCATTGTTGAGTACTTGCATTTCATTGGATGGCCAAGAACATGTATACATGCATGATTTTCTTCAAGAGATGGGAAAAAACATTGTTTTGCAAGAATCTCTGAGTGATGCTGGCAGACGCAGTAGGTCGTGGTCTTGGGAGCAGATTGATCAAGTCTTTAGGGGGAATACAGGAAGCAAAAGTGTTCAAAGTATAGTTTTGAACCTAAAGCAACAATTTGAAGCAAATTGGCACCCAAATTGCTTCTCAAAGATGAGTAATCTTAGATTATTCTGCTTAAGTAATGTTCATCTTTTGCATGGTCTCGATTCTCTTCCTACTACACTAAAAGTTCTCAAATGGGAGAAATATCCTTTGGAAACTCTACCACGCAATATTGACCAACTATATCAACTTGTGGACCTTACCTTACATCGTAGTAGAATCAAGGAACTTTGGAATGGAAGACCGTTTTTAGGAATGTTGAAGTTCATGGACTTGAGTTTTTCCAAGGAGCTAACTGAAACTCCAGATTTCAAAGGAGTTCCAAACCTTGAAAGATTGTTTCTTGAACACTGCATAAAACTAGTTAAGGTTCATGGGTCTCTCGGGAAGCTCAAGAACCTCGTTAAGTTGAGTTTGAGAGGTTGCCAAAATCTTGTGATCCTTCCCAGGAAATTGGAATTAAATTCTCTGGCGGAGTTTTCTCTCTATGGTTGCTCAAAGCTTGAAAAGCTTCCTGAATTTGGAGAAAACATGAATTGTCTCTCCATCTTTGATCTGAGTGGAACTAACATAAGAAAAGTTCCCTCTTCCATTGTTCATTTGACAAATCTTAAGGAGCTATATCTCCATGGATGCAACTGGCAAGCTTGGAATTCATGGAGTTTTTTTGGCTACTTTGGTCATTTGATAGGTCGGTTTCTGGGGAATCCAGTATCCAAGGGATTGAAGCTTCCCAATTCTTTCTCGGGCCTTTCTTCATTAAGAAAACTGGATTTGAGTTTTAGCAATCTGTACGATGGAGCAATCCCTAATGACTTAAGCGGCTTATCATCATTGATGGATTTTAATCTGAGGGGAAACAATTTTACTTCCTTACCTGTTGGCTGCATCTCCAATCTTGTTAACCTTGAGCAATTTGACTTGAGTAATTGTGTTCAGCTTCAGTCATTCCCTCAGCTTCCACCTAATTTAATTAGAGTATATGCTGGTTGCTGCCCTTCTATTGAACCCTTATTGGACATGCAACATCTCTTGGAATCACTACTTATCTATAAGGAGATAAGATCCCAATTACAGTGTTTAAAGAGCAACAATGTCACATTGATCCATTTGGAGCAAGTGTATCTATAA 2769 0.3879 MALMSSSTVGGSCSTVAARLNYHVFLSFRGEDTRRNFTDHLYAALQRKGIVTFRDDQALEGSGQVISENLMKAIEESLFAIVVLSQDYAFSSWCLDELHKIVESKENLTVFPVFYGVDPSDVRHQKGIIRKAFEKHEGKFPLCKVRRWRRALTQVANFAGWDARNKHEAGIVKNIAETIWTKLRVKLPSNFAHLVGLQSKVDTMVSLLKIGLNHKCFVGIWGMGGIGKTTLSRVVYETIRDKFEISCFLANVREDSERNGLVYLQKKFLSGLQLENIKISDSHDGVEAIRSFSRDKKVLIVLDDVSHISQLQNLVGDKDWFGAGSRIIVTTRDIHLLIAHDQFEKYEMKMLGRGESLNLLCKHAFKMDYPQQGYWELSKTVVDYAGGLPLALQVLGSFLCKRSQSEWRDTLDKLKQNLHKDIFKTLRISYDGLDDKELKTIFLDIACFFNWEKKVEVIKIFENCGLHPTIGIQVLIEKSLLSTCISLDGQEHVYMHDFLQEMGKNIVLQESLSDAGRRSRSWSWEQIDQVFRGNTGSKSVQSIVLNLKQQFEANWHPNCFSKMSNLRLFCLSNVHLLHGLDSLPTTLKVLKWEKYPLETLPRNIDQLYQLVDLTLHRSRIKELWNGRPFLGMLKFMDLSFSKELTETPDFKGVPNLERLFLEHCIKLVKVHGSLGKLKNLVKLSLRGCQNLVILPRKLELNSLAEFSLYGCSKLEKLPEFGENMNCLSIFDLSGTNIRKVPSSIVHLTNLKELYLHGCNWQAWNSWSFFGYFGHLIGRFLGNPVSKGLKLPNSFSGLSSLRKLDLSFSNLYDGAIPNDLSGLSSLMDFNLRGNNFTSLPVGCISNLVNLEQFDLSNCVQLQSFPQLPPNLIRVYAGCCPSIEPLLDMQHLLESLLIYKEIRSQLQCLKSNNVTLIHLEQVYL 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1115 922 FunFam Disease resistance protein (TIR-NBS-LRR class) 18 185 - -
Prci8g1115 922 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 445 IPR027417 -
Prci8g1115 922 SMART till_3 21 158 IPR000157 GO:0007165
Prci8g1115 922 Gene3D - 19 184 IPR035897 -
Prci8g1115 922 PRINTS Disease resistance protein signature 675 691 - -
Prci8g1115 922 PRINTS Disease resistance protein signature 292 306 - -
Prci8g1115 922 PRINTS Disease resistance protein signature 385 399 - -
Prci8g1115 922 PRINTS Disease resistance protein signature 217 232 - -
Prci8g1115 922 SUPERFAMILY L domain-like 544 884 - -
Prci8g1115 922 FunFam Disease resistance protein (TIR-NBS-LRR class) 353 434 - -
Prci8g1115 922 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 161 IPR035897 -
Prci8g1115 922 Gene3D - 351 434 IPR042197 -
Prci8g1115 922 Gene3D - 185 345 IPR027417 -
Prci8g1115 922 Gene3D Ribonuclease Inhibitor 537 698 IPR032675 -
Prci8g1115 922 Gene3D Ribonuclease Inhibitor 699 918 IPR032675 -
Prci8g1115 922 Pfam TIR domain 21 193 IPR000157 GO:0007165
Prci8g1115 922 Pfam NB-ARC domain 213 428 IPR002182 GO:0043531
Prci8g1115 922 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 759 IPR044974 GO:0006952
Prci8g1115 922 SUPERFAMILY "Winged helix" DNA-binding domain 421 531 IPR036390 -
Prci8g1115 922 ProSiteProfiles TIR domain profile. 20 187 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1115 Prci-Chr8 7454894 7459334 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1115 21 825 WRKY Transcription Factor Family AT4G12020 31.884 1.45e-92 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1115 - - pcin:129318799 1813.89