Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1114 ATGGTCTCTCTTTTGAAGATAGGGCTGAATCATAAATGTTTTGTAGGAATATGGGGTATGGGCGGAATAGGCAAAACGACTCTTTCTAGAGTTGTTTATGAAACAATCCGAGACAAATTTGAAATTAGTTGCTTTCTTGCCAATGTAAGGGAGGATTCAGAACGTAATGGTCTGGTTTACTTGCAAAAGAAGTTTCTCTCTGGTCTTCAATTAGAAAACATTAAAATCAGTGACTCCCATGATGGAGTTGAGGCGATAAGAAGCTTTTCACGTGATAAAAAAGTTCTTATTGTTCTTGATGATGTAAGTCATATAAGCCAACTACAGAATTTAGTTGGAGATAAAGATTGGTTTGGTGCTGGAAGCAGAATAATAGTAACTACGAGAGATATACACTTGTTGATAGCACATGATCAGTTTGAGAAGTATGAAATGAAGATGTTAGGAAGAGGTGAATCCCTCAATCTCTTGTGTAAGCATGCCTTCAAAATGGATTATCCTCAACAAGGTTATTGGGAATTGTCCAAAACGGTGGTTGATTATGCAGGTGGTCTTCCTTTAGCACTCCAAGTGTTAGGCTCGTTTCTTTGTAAAAGAAGTCAATCTGAATGGAGAGACACATTGGATAAGTTAAAGCAAAATTTACATAAAGATATTTTCAAGACACTTCGCATAAGTTATGATGGGCTAGATGATAAAGAGTTGAAAACAATATTCTTAGACATCGCATGCTTCTTTAATTGGGAGAAAAAAGTTGAAGTGATTAAAATATTTGAAAATTGTGGTCTTCATCCAACAATTGGAATCCAAGTTCTAATTGAAAAATCATTGTTGAGTACTTGCATTTCATTGGATGGCCAAGAACATGTATACATGCATGATTTTCTTCAAGAGATGGGAAAAAACATTGTTTTGCAAGAATCTCTGAGTGATGCTGGCAGACGCAGTAGGTCGTGGTCTTGGGAGCAGATTGATCAAGTCTTTAGGGGGAATACAGGAAGCAAAAGTGTTCAAAGTATAGTTTTGAACCTAAAGCAACAATTTGAAGCAAATTGGCACCCAAATTGCTTCTCAAAGATGAGTAATCTTAGATTATTCTGCTTAAGTAATGTTCATCTTTTGCATGGTCTCGATTCTCTTCCTACTACACTAAAAGTTCTCAAATGGGAGAAATATCCTTTGGAAACTCTACCACGCAATATTGACCAACTATATCAACTTGTGGACCTTACCTTACATCGTAGTAGAATCAAGGAACTTTGGAATGGAAGACCGTTTTTAGGAATGTTGAAGTTCATGGACTTGAGTTTTTCCAAGGAGCTAACTGAAACTCCAGATTTCAAAGGAGTTCCAAACCTTGAAAGATTGTTTCTTGAACACTGCATAAAACTAGTTAAGGTTCATGGGTCTCTCGGGAAGCTCAAGAACCTCGTTAAGTTGAGTTTGAGAGGTTGCCAAAATCTTGTGATCCTTCCCAGGAAATTGGAATTAAATTCTCTGGCGGAGTTTTCTCTCTATGGTTGCTCAAAGCTTGAAAAGCTTCCTGAATTTGGAGAAAACATGAATTGTCTCTCCATCTTTGATCTGAGTGGAACTAACATAAGAAAAGTTCCCTCTTCCATTGTTCATTTGACAAATCTTAAGGAGCTATATCTCCATGGATGCAACTGGCAAGCTTGGAATTCATGGAGTTTTTTTGGCTACTTTGGTCATTTGATAGGTCGGTTTCTGGGGAATCCAGTATCCAAGGGATTGAAGCTTCCCAATTCTTTCTCGGGCCTTTCTTCATTAAGAAAACTGGATTTGAGTTTTAGCAATCTGTACGATGGAGCAATCCCTAATGACTTAAGCGGCTTATCATCATTGATGGATTTTAATCTGAGGGGAAACAATTTTACTTCCTTACCTGTTGGCTGCATCTCCAATCTTGTTAACCTTGAGCAATTTGACTTGAGTAATTGTGTTCAGCTTCAGTCATTCCCTCAGCTTCCACCTAATTTAATTAGAGTATATGCTGGTTGCTGCCCTTCTATTGAACCCTTATTGGACATGCAACATCTCTTGGAATCACTACTTATCTATAAGACATGTAGTCTTCTCCTACATGGAGTCATTTTTCTGCATATTTCAGGAGATAAGATCCCAATTACAGTGTTTAAAGAGCAACAATGTCACATTGATCCATTTGGAGCAAGTGTATCTATAATAGTAGATAACCCTAATTTTTCCTATGAGAGTGAATTGTGGGGAATTGCTGTGTGCCTGGTGGTAAAAAGCAAGAAGGCTTTATATTACTGCTCAAGATCCAAATTTTATTGGAGATTCAGAGCTCTTGAAGAAGATAAAAGCTTGGAGGAACCACATCATGTATTTTATGTGGGAAAAGCATATTCAATCCCTCATCTTTACATAGCATTTTTTCCTTTGATCAATACTCACAAGTTTTGGCGACATTGCCGCCAACTTGAATTGCAAATTGAGGTTGAAAAAGAGTTTAGCATCAACGATTGTGGTTGGCGTCTTATGTGCAAGAAAGATTTTTGA 2544 0.3738 MVSLLKIGLNHKCFVGIWGMGGIGKTTLSRVVYETIRDKFEISCFLANVREDSERNGLVYLQKKFLSGLQLENIKISDSHDGVEAIRSFSRDKKVLIVLDDVSHISQLQNLVGDKDWFGAGSRIIVTTRDIHLLIAHDQFEKYEMKMLGRGESLNLLCKHAFKMDYPQQGYWELSKTVVDYAGGLPLALQVLGSFLCKRSQSEWRDTLDKLKQNLHKDIFKTLRISYDGLDDKELKTIFLDIACFFNWEKKVEVIKIFENCGLHPTIGIQVLIEKSLLSTCISLDGQEHVYMHDFLQEMGKNIVLQESLSDAGRRSRSWSWEQIDQVFRGNTGSKSVQSIVLNLKQQFEANWHPNCFSKMSNLRLFCLSNVHLLHGLDSLPTTLKVLKWEKYPLETLPRNIDQLYQLVDLTLHRSRIKELWNGRPFLGMLKFMDLSFSKELTETPDFKGVPNLERLFLEHCIKLVKVHGSLGKLKNLVKLSLRGCQNLVILPRKLELNSLAEFSLYGCSKLEKLPEFGENMNCLSIFDLSGTNIRKVPSSIVHLTNLKELYLHGCNWQAWNSWSFFGYFGHLIGRFLGNPVSKGLKLPNSFSGLSSLRKLDLSFSNLYDGAIPNDLSGLSSLMDFNLRGNNFTSLPVGCISNLVNLEQFDLSNCVQLQSFPQLPPNLIRVYAGCCPSIEPLLDMQHLLESLLIYKTCSLLLHGVIFLHISGDKIPITVFKEQQCHIDPFGASVSIIVDNPNFSYESELWGIAVCLVVKSKKALYYCSRSKFYWRFRALEEDKSLEEPHHVFYVGKAYSIPHLYIAFFPLINTHKFWRHCRQLELQIEVEKEFSINDCGWRLMCKKDF 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1114 847 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 556 IPR044974 GO:0006952
Prci8g1114 847 SUPERFAMILY "Winged helix" DNA-binding domain 218 328 IPR036390 -
Prci8g1114 847 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 242 IPR027417 -
Prci8g1114 847 Gene3D - 148 231 IPR042197 -
Prci8g1114 847 PRINTS Disease resistance protein signature 472 488 - -
Prci8g1114 847 PRINTS Disease resistance protein signature 14 29 - -
Prci8g1114 847 PRINTS Disease resistance protein signature 182 196 - -
Prci8g1114 847 PRINTS Disease resistance protein signature 89 103 - -
Prci8g1114 847 Gene3D - 1 141 IPR027417 -
Prci8g1114 847 Gene3D Ribonuclease Inhibitor 335 517 IPR032675 -
Prci8g1114 847 FunFam Disease resistance protein (TIR-NBS-LRR class) 150 231 - -
Prci8g1114 847 Pfam NB-ARC domain 12 225 IPR002182 GO:0043531
Prci8g1114 847 Gene3D Ribonuclease Inhibitor 519 698 IPR032675 -
Prci8g1114 847 SUPERFAMILY L domain-like 341 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1114 Prci-Chr8 7454864 7460078 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1114 15 622 WRKY Transcription Factor Family AT4G12020 34.713 4.42e-78 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1114 - - pcin:129318799 1733.77