LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci8g1113	ATGAAAGCTATTGAGGAATCTCTGTTTGCCATTGTCGTTCTGTCCCAAGACTATGCATTCTCGTCTTGGTGTTTGGATGAACTGCACAAGATTGTTGAATCCAAAGAAAACTTGACAGTTTTCCCGGTTTTTTATGGCGTAGATCCGTCTGATGTGCGACACCAAAAGGGAATTATTAGGAAAGCTTTTGAGAAACATGAAGGGAAATTTCCACTTTGTAAGGTGAGAAGATGGAGAAGAGCTTTAACACAAGTTGCAAACTTCGCTGGTTGGGATGCTAGAAACAAGCATGAAGCAGGAATCGTAAAAAATATTGCTGAAACAATATGGACCAAATTGCGTGTTAAATTGCCTTCAAATTTTGCTCATTTAGTTGGACTTCAATCAAAGGTAGACACAATGGTCTCTCTTTTGAAGATAGGGCTGAATCATAAATGTTTTGTAGGAATATGGGGTATGGGCGGAATAGGCAAAACGACTCTTTCTAGAGTTGTTTATGAAACAATCCGAGACAAATTTGAAATTAGTTGCTTTCTTGCCAATGTAAGGGAGGATTCAGAACGTAATGGTCTGGTTTACTTGCAAAAGAAGTTTCTCTCTGGTCTTCAATTAGAAAACATTAAAATCAGTGACTCCCATGATGGAGTTGAGGCGATAAGAAGCTTTTCACGTGATAAAAAAGTTCTTATTGTTCTTGATGATGTAAGTCATATAAGCCAACTACAGAATTTAGTTGGAGATAAAGATTGGTTTGGTGCTGGAAGCAGAATAATAGTAACTACGAGAGATATACACTTGTTGATAGCACATGATCAGTTTGAGAAGTATGAAATGAAGATGTTAGGAAGAGGTGAATCCCTCAATCTCTTGTGTAAGCATGCCTTCAAAATGGATTATCCTCAACAAGGTTATTGGGAATTGTCCAAAACGGTGGTTGATTATGCAGGTGGTCTTCCTTTAGCACTCCAAGTGTTAGGCTCGTTTCTTTGTAAAAGAAGTCAATCTGAATGGAGAGACACATTGGATAAGTTAAAGCAAAATTTACATAAAGATATTTTCAAGACACTTCGCATAAGTTATGATGGGCTAGATGATAAAGAGTTGAAAACAATATTCTTAGACATCGCATGCTTCTTTAATTGGGAGAAAAAAGTTGAAGTGATTAAAATATTTGAAAATTGTGGTCTTCATCCAACAATTGGAATCCAAGTTCTAATTGAAAAATCATTGTTGAGTACTTGCATTTCATTGGATGGCCAAGAACATGTATACATGCATGATTTTCTTCAAGAGATGGGAAAAAACATTGTTTTGCAAGAATCTCTGAGTGATGCTGGCAGACGCAGTAGGTCGTGGTCTTGGGAGCAGATTGATCAAGTCTTTAGGGGGAATACAGGAAGCAAAAGTGTTCAAAGTATAGTTTTGAACCTAAAGCAACAATTTGAAGCAAATTGGCACCCAAATTGCTTCTCAAAGATGAGTAATCTTAGATTATTCTGCTTAAGTAATGTTCATCTTTTGCATGGTCTCGATTCTCTTCCTACTACACTAAAAGTTCTCAAATGGGAGAAATATCCTTTGGAAACTCTACCACGCAATATTGACCAACTATATCAACTTGTGGACCTTACCTTACATCGTAGTAGAATCAAGGAACTTTGGAATGGAAGACCGTTTTTAGGAATGTTGAAGTTCATGGACTTGAGTTTTTCCAAGGAGCTAACTGAAACTCCAGATTTCAAAGGAGTTCCAAACCTTGAAAGATTGTTTCTTGAACACTGCATAAAACTAGTTAAGGTTCATGGGTCTCTCGGGAAGCTCAAGAACCTCGTTAAGTTGAGTTTGAGAGGTTGCCAAAATCTTGTGATCCTTCCCAGGAAATTGGAATTAAATTCTCTGGCGGAGTTTTCTCTCTATGGTTGCTCAAAGCTTGAAAAGCTTCCTGAATTTGGAGAAAACATGAATTGTCTCTCCATCTTTGATCTGAGTGGAACTAACATAAGAAAAGTTCCCTCTTCCATTGTTCATTTGACAAATCTTAAGGAGCTATATCTCCATGGATGCAACTGGCAAGCTTGGAATTCATGGAGTTTTTTTGGCTACTTTGGTCATTTGATAGGTCGGTTTCTGGGGAATCCAGTATCCAAGGGATTGAAGCTTCCCAATTCTTTCTCGGGCCTTTCTTCATTAAGAAAACTGGATTTGAGTTTTAGCAATCTGTACGATGGAGCAATCCCTAATGACTTAAGCGGCTTATCATCATTGATGGATTTTAATCTGAGGGGAAACAATTTTACTTCCTTACCTGTTGGCTGCATCTCCAATCTTGTTAACCTTGAGCAATTTGACTTGAGTAATTGTGTTCAGCTTCAGTCATTCCCTCAGCTTCCACCTAATTTAATTAGAGTATATGCTGGTTGCTGCCCTTCTATTGAACCCTTATTGGACATGCAACATCTCTTGGAATCACTACTTATCTATAAGACATGTAGTCTTCTCCTACATGGAGTCATTTTTCTGCATATTTCAGGAGATAAGATCCCAATTACAGTGTTTAAAGAGCAACAATGTCACATTGATCCATTTGGAGCAAGTGTATCTATAATAGTAGATAACCCTAATTTTTCCTATGAGAGTGAATTGTGGGGAATTGCTGTGTGCCTGGTGGTAAAAAGCAAGAAGGCTTTATATTACTGCTCAAGATCCAAATTTTATTGGAGATTCAGAGCTCTTGAAGAAGATAAAAGCTTGGAGGAACCACATCATGTATTTTATGTGGGAAAAGCATATTCAATCCCTCATCTTTACATAGCATTTTTTCCTTTGATCAATACTCACAAGTTTTGGCGACATTGCCGCCAACTTGAATTGCAAATTGAGGTTGAAAAAGAGTTTAGCATCAACGATTGTGGTTGGCGTCTTATGTGCAAGAAAGATTTTTGA	2943	0.3761	MKAIEESLFAIVVLSQDYAFSSWCLDELHKIVESKENLTVFPVFYGVDPSDVRHQKGIIRKAFEKHEGKFPLCKVRRWRRALTQVANFAGWDARNKHEAGIVKNIAETIWTKLRVKLPSNFAHLVGLQSKVDTMVSLLKIGLNHKCFVGIWGMGGIGKTTLSRVVYETIRDKFEISCFLANVREDSERNGLVYLQKKFLSGLQLENIKISDSHDGVEAIRSFSRDKKVLIVLDDVSHISQLQNLVGDKDWFGAGSRIIVTTRDIHLLIAHDQFEKYEMKMLGRGESLNLLCKHAFKMDYPQQGYWELSKTVVDYAGGLPLALQVLGSFLCKRSQSEWRDTLDKLKQNLHKDIFKTLRISYDGLDDKELKTIFLDIACFFNWEKKVEVIKIFENCGLHPTIGIQVLIEKSLLSTCISLDGQEHVYMHDFLQEMGKNIVLQESLSDAGRRSRSWSWEQIDQVFRGNTGSKSVQSIVLNLKQQFEANWHPNCFSKMSNLRLFCLSNVHLLHGLDSLPTTLKVLKWEKYPLETLPRNIDQLYQLVDLTLHRSRIKELWNGRPFLGMLKFMDLSFSKELTETPDFKGVPNLERLFLEHCIKLVKVHGSLGKLKNLVKLSLRGCQNLVILPRKLELNSLAEFSLYGCSKLEKLPEFGENMNCLSIFDLSGTNIRKVPSSIVHLTNLKELYLHGCNWQAWNSWSFFGYFGHLIGRFLGNPVSKGLKLPNSFSGLSSLRKLDLSFSNLYDGAIPNDLSGLSSLMDFNLRGNNFTSLPVGCISNLVNLEQFDLSNCVQLQSFPQLPPNLIRVYAGCCPSIEPLLDMQHLLESLLIYKTCSLLLHGVIFLHISGDKIPITVFKEQQCHIDPFGASVSIIVDNPNFSYESELWGIAVCLVVKSKKALYYCSRSKFYWRFRALEEDKSLEEPHHVFYVGKAYSIPHLYIAFFPLINTHKFWRHCRQLELQIEVEKEFSINDCGWRLMCKKDF	980

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci8g1113	980	ProSiteProfiles	TIR domain profile.	1	117	IPR000157	GO:0007165
	Prci8g1113	980	FunFam	Disease resistance protein (TIR-NBS-LRR class)	283	364	-	-
	Prci8g1113	980	Gene3D	Ribonuclease Inhibitor	468	649	IPR032675	-
	Prci8g1113	980	Gene3D	-	1	114	IPR035897	-
	Prci8g1113	980	Gene3D	-	281	364	IPR042197	-
	Prci8g1113	980	SUPERFAMILY	Toll/Interleukin receptor TIR domain	2	91	IPR035897	-
	Prci8g1113	980	Pfam	NB-ARC domain	143	358	IPR002182	GO:0043531
	Prci8g1113	980	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	1	689	IPR044974	GO:0006952
	Prci8g1113	980	SUPERFAMILY	"Winged helix" DNA-binding domain	351	461	IPR036390	-
	Prci8g1113	980	Pfam	TIR domain	2	123	IPR000157	GO:0007165
	Prci8g1113	980	PRINTS	Disease resistance protein signature	605	621	-	-
	Prci8g1113	980	PRINTS	Disease resistance protein signature	147	162	-	-
	Prci8g1113	980	PRINTS	Disease resistance protein signature	315	329	-	-
	Prci8g1113	980	PRINTS	Disease resistance protein signature	222	236	-	-
	Prci8g1113	980	Gene3D	-	115	275	IPR027417	-
	Prci8g1113	980	SMART	till_3	1	88	IPR000157	GO:0007165
	Prci8g1113	980	Gene3D	Ribonuclease Inhibitor	653	831	IPR032675	-
	Prci8g1113	980	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	113	375	IPR027417	-
	Prci8g1113	980	SUPERFAMILY	L domain-like	474	813	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci8g1113	Prci-Chr8	7454864	7460078	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci8g1113	1	755	WRKY Transcription Factor Family	AT4G12020	32.432	9.82e-88	307

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci8g1113	-		-	pcin:129318799	2002.64