Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1106 ATGACGAGGGCTAGAGGAGCCGCCGCTGTTAAACAGGCGGCGGCGGCGGCGGCGGCGGAACTCAATGGATCCGGTTCAAGGGCTGTTTTAAAAGAGCCAAGGTACCGGGGCGTGAGGAAGAGACCGTGGGGTAGATTTGCCGCCGAGATCAGAGACCCCATGAAGAAAGCTCGTGTCTGGCTGGGCACCTTCGACTCCGCCGAGGAAGCGGCTCGAGCCTACGATGCCGCCGCGATAGCCCTCCGTGGACCCAAGGCCAAGACCAATTTCCCTCTCTCCCCTTCTTCATTTTCGCCGTTCTGCTACCCCACCACCAACCCCAATGTCAACGACGACGTCTTGGATCACCGGTTGTACGGGAACAATGGTTTTCAGGAGCACCAGATTAATCCCCAGAGACCTGCCACCAGTAGCATGAGTAGTACATCCTTCAGCGGGCCACGGCCACCGTCCACGACGGCTCCGACTGCGGCAAACCGGAGATACCCCCGGACGCCGCCCGTCATGCCAGAGGACTGCCATAGCGACTGCGATTCGTCGTCTTCGGTGATCGACGGCGACGGCGAAGTCGCCGATTTCGCGTCATCTTCTTTCCGTCAACCGTTGCCCTTCGACCTCAACTTCCCACCGTTGGATATCGCGAACGTGGCGGGTGAAGATCTTCACTGTACCGCTCTCTGCCTCTGA 687 0.5997 MTRARGAAAVKQAAAAAAAELNGSGSRAVLKEPRYRGVRKRPWGRFAAEIRDPMKKARVWLGTFDSAEEAARAYDAAAIALRGPKAKTNFPLSPSSFSPFCYPTTNPNVNDDVLDHRLYGNNGFQEHQINPQRPATSSMSSTSFSGPRPPSTTAPTAANRRYPRTPPVMPEDCHSDCDSSSSVIDGDGEVADFASSSFRQPLPFDLNFPPLDIANVAGEDLHCTALCL 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1106 228 SUPERFAMILY DNA-binding domain 34 93 IPR016177 GO:0003677
Prci8g1106 228 CDD AP2 33 93 IPR001471 GO:0003700|GO:0006355
Prci8g1106 228 Pfam AP2 domain 33 83 IPR001471 GO:0003700|GO:0006355
Prci8g1106 228 MobiDBLite consensus disorder prediction 123 162 - -
Prci8g1106 228 Gene3D AP2/ERF domain 34 93 IPR036955 GO:0003700|GO:0006355
Prci8g1106 228 FunFam Ethylene-responsive transcription factor 2 34 92 - -
Prci8g1106 228 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Prci8g1106 228 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Prci8g1106 228 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700|GO:0006355
Prci8g1106 228 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 22 187 - -
Prci8g1106 228 MobiDBLite consensus disorder prediction 123 159 - -
Prci8g1106 228 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1106 Prci-Chr8 7378910 7380360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1106 1 228 AP2-EREBP Transcription Factor Family AT3G20310 55.731 2.72e-56 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci8g1106 AP2 4.7e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1106 K09286 - qsa:O6P43_013653 236.884