Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1105 ATGGCTAGCGAGGAGGAGAGACATCTAGAGACTCAACTGGAGCTTCAATTGCAGGAACAGAGGGATTCACTTTCTGCTCTCAATGATGCTCTGGTCTCTGACCCAGCCAATCCTGAGCTCCTCGCGGTTCATGAGGAGCTTGTTCAGGCAATCAAGGATGCAGAGGAAGGGCTTCTTCACTTAAAGCGTACTCGATTATTGCATGAAGCAGATTCAGTGCTGAGTAGATCTAATCTTTCCACTCCAACAGAGAAAGTTGAGCCATTCGAACCCACTGATGTTGAACCAGACCCTCTTGAGGAACAACATTATTCTGTTGGATCTAAATGTAGATTCCGTCACACTGATGGGCGTTGGTACAATGGTCAAGTAGTGCAGTTAAATAGTTCTTCAGCAAAGATTTCATTCCTTACGCCTACGTCTGAGAATATGGTGATGTGCAAGTTTTTTCTGCAACAACGATGTCGGTTTGGTACTAATTGTCGTCTATCACATGGTATTGATGTTCCACTTTCTTCCCTTAGAAAATATGTTCCTACCATCTGGAAGCAGAACCTGGTTGGTTCAAGTATATGGGCAGTCTCAGATGTCAATGCTGGCATTTGGAAGGAAGCTGAGCTTGCATCCTGGGATGAAGAACTTGGGGTTGGACAAGTTGTTTTCCGAGATGATGGAAGTTCTGTGAACTTAGGAGCTGAAGCTATAGCATCATCTGAATGTGCAGAAGTGAGTGATGAAGAGAGTGATTCCAGCTTGGAACAATCTGATTTTAGTGACTATGAAGAAGATGACCCACAAGGTTTAGGCTTTCTGGAAAGTACCAACCTGCAGCGGGGTATTCAGACTGAAACTGCTATATTTGCTAAGTGGGAGAATCACACCAGGGGTGTAGCTTCCAAAATGATGGCTAATATGGGTTACCGTGAGGGTATGGGTTTAGGTGTTTCTGGTCAGGGAATGCTTAATCCCGTCCCAGTGAAGGTCCTTCCACCAAAGCAATCCTTAGATCATGCTCTTGAATCTCATAAAGATAAAGTAGAAGAGAGCAAAGACAATCAAGGCAAGAAACGAAGTAGAGGTGGTAAGAGGAAGCGTGATAAGAAATTTGCAGAAGCAATTCGTGTAGCAAAAGAAGAGGAGGAATCGGTGTCAGATGTCTTTACACTAATAAATAATCAGCTGGCAAAGCATGGCGAAGCTATAAATGGGGGATCAGTGAAGAAGCAGCAAAGTAAAGGTTCAGGGGAAGGTAAAAAGGTTGATAGGCGGGCTTTGATTGCATACGAAGACGAGGTGAAGGACTTGAGGATTCGAGTTGAGAAGCTTGAAGAAATGGTGAATAGAAACAGGAAAGAGAAGGTAGTTTATGAGGCTGCTATGAGAAAATTAATTGAAACCCGTAAAGCCTTAACAGAGGCTGAAGCAGCTCATGTCTCTGCCTCAAATGCAGTTGTTAGCAAAGAAAAAGAGAAGAGATGGCTGAAATTTTAG 1491 0.4359 MASEEERHLETQLELQLQEQRDSLSALNDALVSDPANPELLAVHEELVQAIKDAEEGLLHLKRTRLLHEADSVLSRSNLSTPTEKVEPFEPTDVEPDPLEEQHYSVGSKCRFRHTDGRWYNGQVVQLNSSSAKISFLTPTSENMVMCKFFLQQRCRFGTNCRLSHGIDVPLSSLRKYVPTIWKQNLVGSSIWAVSDVNAGIWKEAELASWDEELGVGQVVFRDDGSSVNLGAEAIASSECAEVSDEESDSSLEQSDFSDYEEDDPQGLGFLESTNLQRGIQTETAIFAKWENHTRGVASKMMANMGYREGMGLGVSGQGMLNPVPVKVLPPKQSLDHALESHKDKVEESKDNQGKKRSRGGKRKRDKKFAEAIRVAKEEEESVSDVFTLINNQLAKHGEAINGGSVKKQQSKGSGEGKKVDRRALIAYEDEVKDLRIRVEKLEEMVNRNRKEKVVYEAAMRKLIETRKALTEAEAAHVSASNAVVSKEKEKRWLKF 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1105 496 Coils Coil 425 476 - -
Prci8g1105 496 MobiDBLite consensus disorder prediction 338 368 - -
Prci8g1105 496 MobiDBLite consensus disorder prediction 242 266 - -
Prci8g1105 496 MobiDBLite consensus disorder prediction 77 100 - -
Prci8g1105 496 ProSiteProfiles Zinc finger C3H1-type profile. 141 168 IPR000571 GO:0046872
Prci8g1105 496 MobiDBLite consensus disorder prediction 242 269 - -
Prci8g1105 496 SMART c3hfinal6 141 167 IPR000571 GO:0046872
Prci8g1105 496 Pfam CCCH-type zinc finger 146 166 IPR041367 -
Prci8g1105 496 Coils Coil 332 352 - -
Prci8g1105 496 Gene3D - 105 178 - -
Prci8g1105 496 SMART G-patch_5 292 338 IPR000467 GO:0003676
Prci8g1105 496 MobiDBLite consensus disorder prediction 338 355 - -
Prci8g1105 496 SUPERFAMILY CCCH zinc finger 142 166 IPR036855 GO:0046872
Prci8g1105 496 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 22 1 496 - -
Prci8g1105 496 Pfam G-patch domain 294 336 IPR000467 GO:0003676
Prci8g1105 496 ProSiteProfiles G-patch domain profile. 294 340 IPR000467 GO:0003676
Prci8g1105 496 Coils Coil 1 30 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Prci8g1105 G-patch 6.5e-12 CL0449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1105 - - gmx:100794921 709.523