Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1078 ATGGCATCATCGTCAGACTCATGGATGAAGGAATATAATGAAGCCGTGAAACTTGCTGATGATATCAGTGGCATGATTTCTGAATGGAGTTCATTTCCTTCATCAGGACCTGAAACCCAGCGACATGCATCTGCGATAAGAAGGAAGATAACTATATTAGGGACCAGACTTGATAGCTTGCAATCCCTTTTGTCAAAGCTTCCTGGGAAACAGCCTATATCTGACAAGGAGCTGAATCGGCGTAAGGACATGATTGCAAATTTGAGGTCAAAAGTTAACCAAATGGCATCAACGTTGAATATGTCTAACTTTGCAAACAGGGATAGTTTGCTTGGACCAGATATAAAACCAGCTGATCCCATGAGCAGAACAGTTGGCTTGGATAATGGTGGACTTGTTGGACTTCAACGGCAAATTATGAGAGAGCAAGATGAGGGCATTGAGAAATTGGAGCAGACTGTAACTAGTACAAAACATATTGCGTTGGCTGTAAATGAAGAACTGGATTTACACACTAGACTCATTGATGACTTGGACTTGCATGTAGATGTTACGGATTCTCGGCTGCGGAGGGTGCAGAAGAACTTGGCAATTTTGAATAAGCGTACCAAGGGTGGTTGCTCTTGCTTGTGTCTGCTTTTATCAGTTGTTGGTATAGTGGTTTTGGTTGCTGTTATATTTTTGTTGATCAAAGTTTTGTAA 702 0.4145 MASSSDSWMKEYNEAVKLADDISGMISEWSSFPSSGPETQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISDKELNRRKDMIANLRSKVNQMASTLNMSNFANRDSLLGPDIKPADPMSRTVGLDNGGLVGLQRQIMREQDEGIEKLEQTVTSTKHIALAVNEELDLHTRLIDDLDLHVDVTDSRLRRVQKNLAILNKRTKGGCSCLCLLLSVVGIVVLVAVIFLLIKVL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1078 233 Gene3D - 139 201 - -
Prci8g1078 233 PANTHER SYNTAXIN 39 219 IPR045242 -
Prci8g1078 233 CDD SNARE_Qc 140 197 - -
Prci8g1078 233 SUPERFAMILY t-snare proteins 13 100 IPR010989 GO:0016020|GO:0016192
Prci8g1078 233 Pfam SNARE domain 174 224 IPR000727 -
Prci8g1078 233 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 137 199 IPR000727 -
Prci8g1078 233 SMART tSNARE_6 132 199 IPR000727 -
Prci8g1078 233 FunFam syntaxin-51 isoform X2 139 201 - -
Prci8g1078 233 SUPERFAMILY SNARE fusion complex 128 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1078 Prci-Chr8 7180948 7184139 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1078 1 233 SNARE and Associated Proteins AT1G16240 72.103 2.07e-124 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1078 K08503 - qsa:O6P43_014352 370.548