Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci8g1060 | ATGACAGAACCACGTCCTGTAGTCAGAAAGTTCTTGGCCAGACCTCAACATGAAGGTGTTGGGGCCGTTGTTAGAAGAAGCATTGGACGGTTTGAGCTGAAGTACTTTGATCCATTCCTTGTATTGGATGAATTCTCAGTCACTGCCCCTGCTGGATTTCCTGATCATCCACATAGAGGATTTGAGACTGTCACATACATGTTACAGGGAGCTGTGACTCATGAAGATTTTGAAGGTCACAAGGGAACGATAGAAGCTGGTGATTTGCAGTGGATGACTGCAGGCAGAGGGATTGTCCACTCAGAGATGCCTGCAGCTCAAGGCACCCAAAAGGGCCTGCAGCTTTGGATCAACCTTCCTTCCAAATATAAAATGTAA | 378 | 0.4656 | MTEPRPVVRKFLARPQHEGVGAVVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGAVTHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLPSKYKM | 125 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci8g1060 | 125 | CDD | cupin_pirin_N | 22 | 120 | - | - | |
| Prci8g1060 | 125 | PANTHER | PIRIN-RELATED | 2 | 125 | IPR012093 | - | |
| Prci8g1060 | 125 | Pfam | Pirin | 24 | 117 | IPR003829 | - | |
| Prci8g1060 | 125 | SUPERFAMILY | RmlC-like cupins | 5 | 125 | IPR011051 | - | |
| Prci8g1060 | 125 | Gene3D | Jelly Rolls | 3 | 125 | IPR014710 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Prci8g1060 | Prci-Chr8 | 7103227 | 7105792 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Prci8g1060 | 4 | 125 | Calmodulin-binding Proteins | AT3G59220 | 63.115 | 1.08e-52 | 166 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci8g1060 | K06911 | - | pcin:129318909 | 262.692 |