Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1049 ATGAGATTTGAACTTATGACTTTCAAAAACCTTTTCTTCGTTCCCCTCCTCCTTCTTCATGTCTTCATCGTGGTGTCTGGCCAAGCACAAGGTGGGTTTTCAGAATCTGAGCCGTTCTTCAGTTTCATCAGAGCCATTGATCCCCAGAACGTTCTTCACATTAATGGCTCATTTTCTTCATCTGCGAGAACTTCACATCTCTGCATGATGAAGCTGAAGGGTGTTAGATGCGACTCTGAAGGTACCAACATTGTAGAGATTAGGCTAGAAAGCCTGAATCTCACTGGAACAATCGATGCAGAATCTCTGTGCAGGCTTAAGAAGCTTAGGGTTTTGAGCTTAGCTGCGAATAATATCAGAGGCAATGTTCCGAACTCAATTCTGCACTGTGCTAGCTTGTGTTATCTGAATCTTTCAAGCAATCATTTGAATGGGAGAATACCCAGAGGCTTAACGAAACTGAAGTTTCTGAGAACATTGGACATCTCAAACAATAATTTTCTAGGAAAGATGAACTTAAGTCATTTGTTTGCTGATTCGTTGAATGAAGAAGCTGTAATGCAATCAATGGTGGATCCTCCTCTTACCAGTAATATTTCTCAATCTAATAATGATGAAGGAGACAATTTCTCGATCCTATATGTTTTGGTCATTGGAATAATGTTGTTATTCTTGAGTTTTTACTTTGCAAGCATTAAGGTTGGGGAAAAAAGTGCAGATCATGATAATAATGATGATGATAAGACATTGAAGAGCATTGAGCAATTTGATCATGCCATCAGAAAGGCTAAAATAACTGAGGTCAAAGAAGAAGAAGACATGATGATGATGAAGCTGAAGAAAAGAGATCATATTCATACAGATGACCAGCTTGTATTCTTTGAAGAGAATGAGAGATTCACAATGGAGGATCTTCTTGGAGCCAGTGCTGACTTAAGAAGCGAAAGCTTCTGCAGCTTGAAGAGATTGAAGAATTTGCAGATATCCTCAGATGAGTTCAGTAAAACAATGAGGAAGATAAGCATGTTCAAGCATCCTAATATCCTTCCCCTTGTTGCCTACCGTTCTACCAGTGAAGAAAAACTCATCATTTACAGGCACCAGAGCAATGGAAGTCTGCTAAATCTTTTCAAGGACTATCTTGAAGGCAGAAGATATTTTCCATGGAAACTGAGGCTATCTATAGCACGAGGGATAGCAAGAGGATTAGCATGCTTGCACCAGAAAGTGAAAGAACAAGACACAACAATTCCACATGGGAATCTGAAACTATCAAATATCCTTCTCAGTGACAACAACAATGAACCACTTATAAGCGAGCATGGACTATCAAATTTGTTCCTAGACACAACAACCAGACTGTTCTTCATTTTGGGGCTGGCATACACAGCCCCAGAGAAGAGTCTATCAGAGAAGGCTAATGTTTATAGCTTTGGAGTAATCTTGTTAGAACTACTCACAGGAAAGAGCATAGAACTGAGCAGAATAGATCTCACAAAGTGGGTCAGATCCATGGTGAAGGAGGAGTGGACTGTGGAAGTGTTTGACAAAGAGGTTAGGGAAGATGAGTATCAGTGGGCATTTCCTGTGCTAAACGTGGCCCTCATGCGCGTTTTAAGTCTCCCAGAAACTCGACCTTCCATGGAAGAGTCGGTGAAGATGATAGAGGAAGTGATGAAGGAGAGAGAAGAAAATGATAATAATAAGAATGTTTCAACAACGGTAGCTTGCTGCCCTATTGGATCCAACCAGCATGAAGCTTGTTGCTCGCTTCATAAGATCATTCCTGATATGTGGGATTCTCCAGGATCAAATTATTGA 1821 0.4042 MRFELMTFKNLFFVPLLLLHVFIVVSGQAQGGFSESEPFFSFIRAIDPQNVLHINGSFSSSARTSHLCMMKLKGVRCDSEGTNIVEIRLESLNLTGTIDAESLCRLKKLRVLSLAANNIRGNVPNSILHCASLCYLNLSSNHLNGRIPRGLTKLKFLRTLDISNNNFLGKMNLSHLFADSLNEEAVMQSMVDPPLTSNISQSNNDEGDNFSILYVLVIGIMLLFLSFYFASIKVGEKSADHDNNDDDKTLKSIEQFDHAIRKAKITEVKEEEDMMMMKLKKRDHIHTDDQLVFFEENERFTMEDLLGASADLRSESFCSLKRLKNLQISSDEFSKTMRKISMFKHPNILPLVAYRSTSEEKLIIYRHQSNGSLLNLFKDYLEGRRYFPWKLRLSIARGIARGLACLHQKVKEQDTTIPHGNLKLSNILLSDNNNEPLISEHGLSNLFLDTTTRLFFILGLAYTAPEKSLSEKANVYSFGVILLELLTGKSIELSRIDLTKWVRSMVKEEWTVEVFDKEVREDEYQWAFPVLNVALMRVLSLPETRPSMEESVKMIEEVMKEREENDNNKNVSTTVACCPIGSNQHEACCSLHKIIPDMWDSPGSNY 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1049 606 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 172 IPR046959 -
Prci8g1049 606 ProSiteProfiles Protein kinase domain profile. 254 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1049 606 SUPERFAMILY Protein kinase-like (PK-like) 312 563 IPR011009 -
Prci8g1049 606 Gene3D Transferase(Phosphotransferase) domain 1 369 580 - -
Prci8g1049 606 Pfam Leucine rich repeat 108 167 IPR001611 GO:0005515
Prci8g1049 606 SUPERFAMILY L domain-like 50 338 - -
Prci8g1049 606 Gene3D Phosphorylase Kinase; domain 1 307 367 - -
Prci8g1049 606 Pfam Protein kinase domain 317 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1049 606 Gene3D Ribonuclease Inhibitor 44 201 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1049 Prci-Chr8 7013444 7016441 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1049 74 576 Receptor kinase-like Gene Family AT5G05160 28.642 1.70e-56 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci8g1049 Pkinase 8.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1049 - - vra:106763201 566.614