Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1048 ATGCCGATTGTGAAGCCTGAAGCATCGGGAGATTCCGAACCGTTCGTCGAAATCGACCCGACCGGAAGGTACGGCCGATACGGTGAGCTGTTAGGGTCCGGTGCGGTGAAGAAAGTGTACAGAGCATTTGATCAAGAGGAAGGAATAGAGGTGGCGTGGAACCAGGTAAAGCTGAGAAACTTCAGTGATGAACCGGCCATGGTGGAACGGCTTTACTCTGAAGTGAGGTTGCTGAGAAGCCTCACCAACAAGAACATCATAGCGCTCTACAATTTCTGGAGGGACGACGAACGCAACACTCTGAACTTCATCACTGAAGTCTGTACGAGCGGGAATCTGAGGGAGTACAGGAAGAAGCACAAGCATGTGTCGATGAAGGCATTGAAGAAATGGTCGAAGCAGATTCTGAAAGGGTTGAACTATATGCATACGCACGAGCCTTGTATCATCCACAGAGATCTCAATTGCAGCAATATTTTCGTCAATGGGAATACTGGCCAGGTTAAGATTGGTGACTTGGGGTTGGCAGCAATAGTGGGGAAGAACCACTCTGCACATTCAATTCTGGGGACGCCAGAATTCATGGCGCCGGAGTTATACGACGAGAACTATACAGAACTGGTGGACATATACTCATTTGGGATGTGTGTGTTGGAGATGGTGACAATGGAGATTCCTTACAGTGAGTGTGACAATGTGGCGAGGATATACAAGAAGGTTTCTTCTGGTGTGAGACCTCAGGCACTGAACAAGGTCATGGATTCAGAGGTTAAGGCTTTCATTGAGAGGTGTCTTGCTCAGCCAAGGGCAAGACCCTCTGCTGCTCAGCTCCTCAGAGATCCTTTCTTTGATGGCATTGTTGACGATGACGAAAATAATAATTCTATTTCCTAA 894 0.4787 MPIVKPEASGDSEPFVEIDPTGRYGRYGELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRNFSDEPAMVERLYSEVRLLRSLTNKNIIALYNFWRDDERNTLNFITEVCTSGNLREYRKKHKHVSMKALKKWSKQILKGLNYMHTHEPCIIHRDLNCSNIFVNGNTGQVKIGDLGLAAIVGKNHSAHSILGTPEFMAPELYDENYTELVDIYSFGMCVLEMVTMEIPYSECDNVARIYKKVSSGVRPQALNKVMDSEVKAFIERCLAQPRARPSAAQLLRDPFFDGIVDDDENNNSIS 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1048 297 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 284 - -
Prci8g1048 297 FunFam Probable serine/threonine-protein kinase WNK1 10 106 - -
Prci8g1048 297 FunFam probable serine/threonine-protein kinase WNK9 108 290 - -
Prci8g1048 297 Pfam Protein kinase domain 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1048 297 ProSiteProfiles Protein kinase domain profile. 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1048 297 Gene3D Transferase(Phosphotransferase) domain 1 108 287 - -
Prci8g1048 297 SUPERFAMILY Protein kinase-like (PK-like) 21 289 IPR011009 -
Prci8g1048 297 CDD STKc_WNK 23 283 - -
Prci8g1048 297 PIRSF TyrPK_CSF1-R 119 280 - -
Prci8g1048 297 PIRSF TyrPK_CSF1-R 25 131 - -
Prci8g1048 297 Gene3D Phosphorylase Kinase; domain 1 10 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1048 Prci-Chr8 7003268 7005706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1048 7 287 MAP Kinase Kinase Kinase AT5G55560 83.274 0.0 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Prci8g1048 Pkinase 2e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1048 K08867 - gmx:100816060 536.569