Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1046 ATGGACAACACTATCAACTCCTCCGACGCCCGTTCCGGTTCGGAGCTCCGGCTCCGCCAGGTTGCTTCTTCCGATTCGACTCAATTCGTCGTTTCCCGAGGTGCCAGGTACAAGCTCTTGTCTCCTGCTAGTCTTCCGATCTCCAGGTCGCCCTGTATCACGATTCCCCCTGGTCTTAGTCCCTCGTCCTTCCTCGAGTCCCCCGTGCTTCTCTCCAACGTCAAGGTGGAGCCTTCACCAACCACTGGGTCTCTTACTAAACCTCAGTCTGCTCAAGATTCTGTTTCTTCTGCAACATATCCTTCAACAACTGTACGCTTCAAAACCAATACTGTTGATGACAAAATATGTGGCTTCTTTGAGTTTAACTCAAACAATAGATCGAACATGGCTTCCACAGATTTCAACAACCATGTAAATGAACCATCTATGCAAATACAAGGTTCGAGCCCAGCTCAGTCTTCTGCTTCATCACCATTAGTGAAAAGTGAGATGGCAATGCCCTCAAATGAATTAAGTTTATCATCACCTGTTCAAATGGTTTGTTCAGGGGCTAGTGCTCCTGTTCAAGCCGATATGGATGGGTCTAACCCTTCCAGAGGCAGCGGTGTCTCAGTTGCTGCTGAGAGAACATCTGATGATGGATATAATTGGCGGAAATATGGACAGAAGCATGTTAAAGGGAGTGAATTTCCACGCTGCTATTACAAATGCACACATCCTAACTGCGAAGTCAAAAAACTATTTGAACGCTCTCATGATGGGCAAATCACAGAGATAATTTACAAGGGATCACATGATCATCCTAAACCTCAACCCAGTCGCCGATACTCTTCTGGTACTACTATGTCTATGCATGAGGAGAGATCTGATAAACCTTCATCGTTGTCTGGCCAAGATGTTCATATGTATGGTCAAGTGTCTCACACTACTGAGCCCAACGGTAATCCAGAGTTATCTGCTTTAGCAGCAAATGATGATGGTCGGGAGGGTGCAGGATTAGCTTCTAATAGGATCAGTGATGAGGTTGATGATGATGATCCCTTCTCAAAGCGAAGGAAGGTAGAGAATGGAAATGCTGACATTACTCCTATAGTTAAGCCTATTCGAGAACCAAGGGTTGTTGTACAAACTCTAAGTGAGGTTGACATATTGGATGATGGGTATCGTTGGCGAAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCCAACCCTAGGAGTTACTACAAATGCACAAATGCTGGCTGCCCTGTTAGAAAACATGTGGAAAGGGCTTCTCATGATCCCAAAGCAGTAATAACCACATACGAGGGTAAGCACAATCATGATGTGCCTACTGCAAGAAGCAGTAGCCATGATACAGCAGGACCAGCAGCTGCAGCCGGACAGACACGAATAAGATCGGAAGAAAGCGATACTATTAGCCTTGATCTCGGGATGGGAATCAGTTCGGCTGCTGAAAATAGATTGAATGGGCAAGGGAAAATGCTACTCTCTGAATTTGGGAATGGTCAAACTCATGCTAACAGTTCCAATTTCAAGTTTGTTCATAACACCCCAGCTCCAGCATACTTTGGTGTTCTAAACAATGGCTCAAATCCATACGGTTCTTCTAGAGAACCTCCATCTTTGAACCATTCCACTTATCGGTGCCCACAGGGCATGGGAAGAATACTAACAGGTCCATGA 1689 0.4565 MDNTINSSDARSGSELRLRQVASSDSTQFVVSRGARYKLLSPASLPISRSPCITIPPGLSPSSFLESPVLLSNVKVEPSPTTGSLTKPQSAQDSVSSATYPSTTVRFKTNTVDDKICGFFEFNSNNRSNMASTDFNNHVNEPSMQIQGSSPAQSSASSPLVKSEMAMPSNELSLSSPVQMVCSGASAPVQADMDGSNPSRGSGVSVAAERTSDDGYNWRKYGQKHVKGSEFPRCYYKCTHPNCEVKKLFERSHDGQITEIIYKGSHDHPKPQPSRRYSSGTTMSMHEERSDKPSSLSGQDVHMYGQVSHTTEPNGNPELSALAANDDGREGAGLASNRISDEVDDDDPFSKRRKVENGNADITPIVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARSSSHDTAGPAAAAGQTRIRSEESDTISLDLGMGISSAAENRLNGQGKMLLSEFGNGQTHANSSNFKFVHNTPAPAYFGVLNNGSNPYGSSREPPSLNHSTYRCPQGMGRILTGP 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1046 562 MobiDBLite consensus disorder prediction 190 206 - -
Prci8g1046 562 SUPERFAMILY WRKY DNA-binding domain 209 271 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g1046 562 Gene3D WRKY domain 203 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g1046 562 Gene3D WRKY domain 370 446 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g1046 562 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 65 468 IPR044810 GO:0003700
Prci8g1046 562 MobiDBLite consensus disorder prediction 77 100 - -
Prci8g1046 562 SUPERFAMILY WRKY DNA-binding domain 377 445 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g1046 562 SMART WRKY_cls 212 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g1046 562 SMART WRKY_cls 385 444 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g1046 562 MobiDBLite consensus disorder prediction 189 210 - -
Prci8g1046 562 FunFam WRKY transcription factor 202 272 - -
Prci8g1046 562 ProSiteProfiles WRKY domain profile. 380 445 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g1046 562 MobiDBLite consensus disorder prediction 261 354 - -
Prci8g1046 562 FunFam WRKY transcription factor 33 372 438 - -
Prci8g1046 562 MobiDBLite consensus disorder prediction 339 354 - -
Prci8g1046 562 MobiDBLite consensus disorder prediction 133 163 - -
Prci8g1046 562 Pfam WRKY DNA -binding domain 386 442 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g1046 562 Pfam WRKY DNA -binding domain 213 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g1046 562 ProSiteProfiles WRKY domain profile. 207 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g1046 562 MobiDBLite consensus disorder prediction 441 469 - -
Prci8g1046 562 MobiDBLite consensus disorder prediction 296 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1046 Prci-Chr8 6978390 6983379 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1046 40 562 WRKY Transcription Factor Family AT4G26640 57.328 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci8g1046 WRKY 1.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1046 - - gmx:100781491 806.979