Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1045 ATGGACAACACTATCAACTCCTCCGACGCCCGTTCCGGTTCGGAGCTCCGGCTCCGCCAGGTTGCTTCTTCCGATTCGACTCAATTCGTCGTTTCCCGAGGTGCCAGGTACAAGCTCTTGTCTCCTGCTAGTCTTCCGATCTCCAGGTCGCCCTGTATCACGATTCCCCCTGGTCTTAGTCCCTCGTCCTTCCTCGAGTCCCCCGTGCTTCTCTCCAACGTCAAGGTGGAGCCTTCACCAACCACTGGGTCTCTTACTAAACCTCAGTCTGCTCAAGATTCTGTTTCTTCTGCAACATATCCTTCAACAACTGCTTCCACAGATTTCAACAACCATGTAAATGAACCATCTATGCAAATACAAGGTTCGAGCCCAGCTCAGTCTTCTGCTTCATCACCATTAGTGAAAAGTGAGATGGCAATGCCCTCAAATGAATTAAGTTTATCATCACCTGTTCAAATGGTTTGTTCAGGGGCTAGTGCTCCTGTTCAAGCCGATATGGATGGGTCTAACCCTTCCAGAGGCAGCGGTGTCTCAGTTGCTGCTGAGAGAACATCTGATGATGGATATAATTGGCGGAAATATGGACAGAAGCATGTTAAAGGGAGTGAATTTCCACGCTGCTATTACAAATGCACACATCCTAACTGCGAAGTCAAAAAACTATTTGAACGCTCTCATGATGGGCAAATCACAGAGATAATTTACAAGGGATCACATGATCATCCTAAACCTCAACCCAGTCGCCGATACTCTTCTGGTACTACTATGTCTATGCATGAGGAGAGATCTGATAAACCTTCATCGTTGTCTGGCCAAGATGTTCATATGTATGGTCAAGTGTCTCACACTACTGAGCCCAACGGTAATCCAGAGTTATCTGCTTTAGCAGCAAATGATGATGGTCGGGAGGGTGCAGGATTAGCTTCTAATAGGATCAGTGATGAGGTTGATGATGATGATCCCTTCTCAAAGCGAAGGAAGGTAGAGAATGGAAATGCTGACATTACTCCTATAGTTAAGCCTATTCGAGAACCAAGGGTTGTTGTACAAACTCTAAGTGAGGTTGACATATTGGATGATGGGTATCGTTGGCGAAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCCAACCCTAGGAGTTACTACAAATGCACAAATGCTGGCTGCCCTGTTAGAAAACATGTGGAAAGGGCTTCTCATGATCCCAAAGCAGTAATAACCACATACGAGGGTAAGCACAATCATGATGTGCCTACTGCAAGAAGCAGTAGCCATGATACAGCAGGACCAGCAGCTGCAGCCGGACAGACACGAATAAGATCGGAAGAAAGCGATACTATTAGCCTTGATCTCGGGATGGGAATCAGTTCGGCTGCTGAAAATAGATTGAATGGGCAAGGGAAAATGCTACTCTCTGAATTTGGGAATGGTCAAACTCATGCTAACAGTTCCAATTTCAAGTTTGTTCATAACACCCCAGCTCCAGCATACTTTGGTGTTCTAAACAATGGCTCAAATCCATACGGTTCTTCTAGAGAACCTCCATCTTTGAACCATTCCACTTATCGGTGCCCACAGGGCATGGGAAGAATACTAACAGGTCCATGA 1611 0.4618 MDNTINSSDARSGSELRLRQVASSDSTQFVVSRGARYKLLSPASLPISRSPCITIPPGLSPSSFLESPVLLSNVKVEPSPTTGSLTKPQSAQDSVSSATYPSTTASTDFNNHVNEPSMQIQGSSPAQSSASSPLVKSEMAMPSNELSLSSPVQMVCSGASAPVQADMDGSNPSRGSGVSVAAERTSDDGYNWRKYGQKHVKGSEFPRCYYKCTHPNCEVKKLFERSHDGQITEIIYKGSHDHPKPQPSRRYSSGTTMSMHEERSDKPSSLSGQDVHMYGQVSHTTEPNGNPELSALAANDDGREGAGLASNRISDEVDDDDPFSKRRKVENGNADITPIVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARSSSHDTAGPAAAAGQTRIRSEESDTISLDLGMGISSAAENRLNGQGKMLLSEFGNGQTHANSSNFKFVHNTPAPAYFGVLNNGSNPYGSSREPPSLNHSTYRCPQGMGRILTGP 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1045 536 MobiDBLite consensus disorder prediction 235 328 - -
Prci8g1045 536 MobiDBLite consensus disorder prediction 313 328 - -
Prci8g1045 536 SUPERFAMILY WRKY DNA-binding domain 351 419 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g1045 536 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 65 442 IPR044810 GO:0003700
Prci8g1045 536 MobiDBLite consensus disorder prediction 77 149 - -
Prci8g1045 536 FunFam WRKY transcription factor 176 246 - -
Prci8g1045 536 SUPERFAMILY WRKY DNA-binding domain 183 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g1045 536 MobiDBLite consensus disorder prediction 162 184 - -
Prci8g1045 536 ProSiteProfiles WRKY domain profile. 354 419 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g1045 536 MobiDBLite consensus disorder prediction 415 443 - -
Prci8g1045 536 FunFam WRKY transcription factor 33 346 412 - -
Prci8g1045 536 MobiDBLite consensus disorder prediction 270 292 - -
Prci8g1045 536 Pfam WRKY DNA -binding domain 187 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g1045 536 Pfam WRKY DNA -binding domain 360 416 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g1045 536 ProSiteProfiles WRKY domain profile. 181 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g1045 536 SMART WRKY_cls 359 418 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g1045 536 SMART WRKY_cls 186 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g1045 536 MobiDBLite consensus disorder prediction 164 180 - -
Prci8g1045 536 MobiDBLite consensus disorder prediction 1 25 - -
Prci8g1045 536 Gene3D WRKY domain 344 420 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g1045 536 Gene3D WRKY domain 177 246 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1045 Prci-Chr8 6978390 6983384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1045 40 536 WRKY Transcription Factor Family AT4G26640 55.970 0.0 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci8g1045 WRKY 1.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1045 - - gmx:100816583 759.214