Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1044 ATGGAAACTTCGGAGAAACATTCATATGGGTCTGGAAGGTTCTATGTTGGGCACCAAGACTACAACTCATCCGATAACACCAGCCAAGTGACTACTTACTCTTCAGTTCAGACTTTAGAGCAGCATTACACCCTAGAATCTTCCTCAAGAACAAACAGTTTCCCAAACCATAATAATTCTCCATCTACTGCCAATTTCTCACCTAATGACAGCCCTGCGTCACAGCTGGAGTCAAATTCTTATGCCCTAAAGTCTCAACACTCACTTGATATCATCAATGGCTCGCTAGAGAATGAATCTTGCTTGACAAATGACCTTGATGACTTGAGCCACAAGATAAGAGAGCTCGAAACTGCTATGTTGGGACTTGATACAGAAATTCTTGGGATGTATGATACTGTAGTTCCTGTGGAATCTAATCAGATTTTGTCAGAGGCAGAGAAGTGGAAGCTAACAATGGAGATAGTATGCAGAGGGGATTTGAAAGAAATGCTTTATGCTTGCGCAAAAGCGATGGATTCAAATGATACAGAGACAACTGAGTTGTTGATGTCTGAGATTCGGAAAATGGTGTCCATTTCAGGTAGCCCAGTCCAACGAATAGGAGCTTATATGTTGGAGTCTCTTGTGGCAAGGATGGCCAGTTCTGGGAGCGCAATCTACAAGGCTTTAAAATGCAAGGAGCCTACCGGTAATGAACTCCTTTCTTACATGCACTTGCTTTATGAAATCTGCCCATACTTCAAGTTTGGGTATTTATCAGCAAATGGGGCAATTGCCGAAGCCATGAAGGAAGAAAATAGGATCCATATCATTGATTTTCAGATTAACCAGGGCGGCCAGTGGATAAGCCTAATTCAAGCTCTTGCTGGACGACCAGGAGGGCCCCCAGAGCTCAGAATTACTGGTTTTGATGACTCTACTTCAAATTTTGCTCGTGGAGGGGGTCTCAATATCGTGGGGAACAGACTATCAAGACTTGCACAATCATGTCAGGTTCCCTTTGAGTTCCATGCTGGTGGAGTTGCTCCTTCCAAGGTGCAACTCAAAGATCTTGATCTTCGACCAGGTGAAGCTGTTGCTGTAAATTTTGCCATGATGTTGCACCATATACCGGACGAAAGCGTGGATAGTCAGAATCCCCGTGACCAGTTGTTGAGATTGGCAAAGTACTTGTGCCCCAAAGTGGTGACTCTCGTGGAGCAGGAATCCAACACCAACACTGTCCCATTCTTCCCCCGTTTCGTTGAGACAATGAACTATTATTTGCCTATTTTCGAGTCAATTGATATAGTTCTGCCAAGGGAGCACAAGGAGAGGATCAATGTGGAACAACACTGTCTGGCACGAGAACTTGTCAACTTAGTTGCATGTGAAGGTGCAGAAAGGGTGGAACGCCACGAGCCTCTAACGATGTGGAGGTCACGCTTTGCCATGGCTGGATTTAAGCCGTATCCATTGAGCTCCTTTGTGAATTCTACCATCAAGAATCTGCTGGAGAACTACTGTGGAAATTATACTCTAGAAGAGAGAGATGGTGCACTATACCTTGGTTGGATGAATCAACCTCTTATTGCCTCTTGTGCTTGGAGATAA 1596 0.4442 METSEKHSYGSGRFYVGHQDYNSSDNTSQVTTYSSVQTLEQHYTLESSSRTNSFPNHNNSPSTANFSPNDSPASQLESNSYALKSQHSLDIINGSLENESCLTNDLDDLSHKIRELETAMLGLDTEILGMYDTVVPVESNQILSEAEKWKLTMEIVCRGDLKEMLYACAKAMDSNDTETTELLMSEIRKMVSISGSPVQRIGAYMLESLVARMASSGSAIYKALKCKEPTGNELLSYMHLLYEICPYFKFGYLSANGAIAEAMKEENRIHIIDFQINQGGQWISLIQALAGRPGGPPELRITGFDDSTSNFARGGGLNIVGNRLSRLAQSCQVPFEFHAGGVAPSKVQLKDLDLRPGEAVAVNFAMMLHHIPDESVDSQNPRDQLLRLAKYLCPKVVTLVEQESNTNTVPFFPRFVETMNYYLPIFESIDIVLPREHKERINVEQHCLARELVNLVACEGAERVERHEPLTMWRSRFAMAGFKPYPLSSFVNSTIKNLLENYCGNYTLEERDGALYLGWMNQPLIASCAWR 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1044 531 ProSiteProfiles GRAS family profile. 152 531 IPR005202 -
Prci8g1044 531 Pfam GRAS domain family 161 531 IPR005202 -
Prci8g1044 531 Coils Coil 99 126 - -
Prci8g1044 531 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 88 525 IPR005202 -
Prci8g1044 531 MobiDBLite consensus disorder prediction 45 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1044 Prci-Chr8 6972982 6976184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1044 1 531 GRAS Transcription Factor Family AT1G50600 58.287 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci8g1044 GRAS 7.8e-130 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1044 - - gmx:100817120 746.888