Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1013 ATGGGGCTATCTAAAGTTTCAATTTTTCCACTTCTGGTTTTCTGGGTTTGTGTTCAGTTGGATTTAGCAGAAGCTCTGTCAGACTACGACCACAACCATGTCAGGAATTACATTAGCTGGAAGGATCTGTGGGTAGATGAACAGAGGCTGACCTCGGACCCCATTGACGATGCTCGAGTTATTTTCGTTGACCAGCATGGCAGGGGACATTCTAGGACTGTCCAAGAAGCTGTAGATATGGTTCCTGACAACAATTCAGAAAGAATCAAAATTTACATATACCCTGGAATTTACAGAGAGAAAGTGTTTGTGCCAAGAACGAAGGGGTATGTATCAATGATTGGAGGAAGAAATGGAACAGCGAGTGCAGTGATTACGTGGAACAGTAAATCATCGGACAGAGGTTTTGATGGACAAGAACTGGGGACCTATGCTTCTGCAACTGTGACTGTAGAATCCGATTATTTCTGTGCAACCAGGCTCACTTTTGAGAACTCGGTAATGGCGGTGAATGGAGGAGATGGAATGCAAGGAGTGGCACTGAGGGTGGACAGTGAAAGGGCAATGTTTTATAGGGTGTGGATCAAAGGGGAACAAGACACTTTGTTGGACAACACAGGCACACATTATTTCTATCAGTGTCATATCCAAGGCAAAATTGATTTCATATTTGGCAATGCAAAATCACTCTACCAGAACTGTGATCTTCATTCAATAGCAGAGACATATGGAGCAATAGCGGCACATCACAGGAATGCTGACAGTGAAGACACAGGCTTCTCCTTTGTAAACTGCTCCATCACAGGCACTGGAAGTGTCTTTCTTGGCAGAGCCTGGGGTGACTATTCCAGAATCATCTATTCTCTATGCTATATGGATGATATCATCACCCCAGAAGGCTGGACTGATTGGAACCACCCATCCAGAAAGATGACTGCTGTGTTTGGGGAGTATCAGTGAGGGGTTGGAGCAGATAGAATGGGAAGGGTAGAATGGTCAAAATCTTTGAGCTATGATGAAGCAAGGCCATTTCTGGATGAGAGTTTCATAAATGGGAATCAGTGGCTTAAGCTATAG 1077 0.442 MGLSKVSIFPLLVFWVCVQLDLAEALSDYDHNHVRNYISWKDLWVDEQRLTSDPIDDARVIFVDQHGRGHSRTVQEAVDMVPDNNSERIKIYIYPGIYREKVFVPRTKGYVSMIGGRNGTASAVITWNSKSSDRGFDGQELGTYASATVTVESDYFCATRLTFENSVMAVNGGDGMQGVALRVDSERAMFYRVWIKGEQDTLLDNTGTHYFYQCHIQGKIDFIFGNAKSLYQNCDLHSIAETYGAIAAHHRNADSEDTGFSFVNCSITGTGSVFLGRAWGDYSRIIYSLCYMDDIITPEGWTDWNHPSRKMTAVFGEYQCXGVGADRMGRVEWSKSLSYDEARPFLDESFINGNQWLKL 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1013 359 Pfam Pectinesterase 62 354 IPR000070 GO:0030599|GO:0042545
Prci8g1013 359 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 56 358 - -
Prci8g1013 359 SUPERFAMILY Pectin lyase-like 58 358 IPR011050 -
Prci8g1013 359 FunFam Pectinesterase 56 359 - -
Prci8g1013 359 Gene3D - 59 359 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1013 Prci-Chr8 6750749 6752770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1013 11 310 Carbohydrate Esterase AT5G55590 55.937 7.02e-128 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1013 K01051 - gmx:100813382 479.174