Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0987 ATGATGAGAGAACAGGATCAGTACATGCCGATCGCGAACGTCATCCGAATCATGCGCCGGATCCTTCCGCCGCACGCCAAGATCTCCGACGAAGCCAAAGAGACGGTACAGGAGTGTGTCTCTGAGTACATCAGCTTCATCACCAGCGAGGCTAACCAGCGGTGCCGGCAGGAGCAGCGCAAGACGGTGACGGCGGATGACGTACTCTGGGCCATGGAAAAGCTGGGATTCGACGACTACGTCGGGCCTCTCTCCGTCTACCTTCACCGCTACCGTAACGGTGACGGTGCAGGTAGCAGCCATTATGTCCCCCGGGGACAGCAAGTGCTGGCTCCCGAGCTTGCACCAGCAATGCCGCCACCTCCACCACCGTCATACTATTACGGATCGGGTTATCCGGTGGGACCGAGTCAGATGGGGCCGGGAGCTGGTAGCTCAAGTAGTGGCACCGGCGGCCCGGCGTATTATGATCCGTATGCTCACCAGAGACATGACCGTTTCTGA 504 0.5913 MMREQDQYMPIANVIRIMRRILPPHAKISDEAKETVQECVSEYISFITSEANQRCRQEQRKTVTADDVLWAMEKLGFDDYVGPLSVYLHRYRNGDGAGSSHYVPRGQQVLAPELAPAMPPPPPPSYYYGSGYPVGPSQMGPGAGSSSSGTGGPAYYDPYAHQRHDRF 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0987 167 FunFam Nuclear transcription factor Y subunit B-6 1 110 - -
Prci8g0987 167 Gene3D Histone, subunit A 1 108 IPR009072 GO:0046982
Prci8g0987 167 PRINTS CCAAT-binding transcription factor subunit A signature 36 54 - -
Prci8g0987 167 PRINTS CCAAT-binding transcription factor subunit A signature 74 92 - -
Prci8g0987 167 PRINTS CCAAT-binding transcription factor subunit A signature 55 73 - -
Prci8g0987 167 SUPERFAMILY Histone-fold 5 96 IPR009072 GO:0046982
Prci8g0987 167 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 9 72 IPR003958 -
Prci8g0987 167 MobiDBLite consensus disorder prediction 128 167 - -
Prci8g0987 167 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 2 97 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0987 Prci-Chr8 6499899 6501020 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0987 2 96 CCAAT-HAP3 Transcription Factor Family AT5G47670 77.895 4.27e-54 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Prci8g0987 CBFD_NFYB_HMF 1.3e-24 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0987 K08065 - gmx:547959 172.555