Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0954 ATGCAGTTTGAAGATGTAGAGTACAAAGTGAGGAATAGTCATGCAGTGTCGAGGTTGAAGAGAACGGTGTCAAAAGTGGCCACACAAGTCAGTGAAAACCAAGAAAGATACAAGAAAATCTTGAAGGGTATTACTGGAAGCATAGGTCCGGGCGAGATTCTTGCTCTCATGGGTCCTTCTGGTAGTGGCAAGACAACCTTGTTGAAGGTCATAGGAGGAAGATTAACTGACAATGTCAAAGGAAAAGTTACTTACAATGATGTTGGATACAGTTCTGCTATCAAGAGAAGAATTGGATTTGTGACACAAGATGATGTTTTGTTTCCACAACTAACAGTGGAAGAAACACTAGTTTTCTCTGCATTCTTAAGGTTACCAGCCAACATGAGCCGACAACAAAAATTTGAGAGAGTGGAGGCAGCCCTAAAAGATCTAGGCCTTGAAAGATGTCGGCACACAAAAATAGGAGGAGGATTTATTAAAGGCATATCAGGAGGGGAAAGGAAGAGAACCAGCATAGGGCATGAGATTCTTGTGGACCCTTCACTGCTTCTACTTGATGAGCCAACTTCTGGCCTTGATTCCTCTTCAGCAAACAGACTTCTGCTCACTCTTCATGGACTTGCCAAGGCTGGAAGGACAATAATCACAACAATTCATCAGCCATCCAGCAGGATCTTTCACATGTTTGACAAACTTCTTCTGATATCAGAAGGCTATCCAATTTACTATGGGAAGGCGAGGGATTCGATGGACTATTTCTCATCCTTGAGGTTCATCCCACACATACCCATGAATCCTGCAGAGTTCTTGCTTGACTTGGCCACTGGACAAGTGAATGATATAAGCATTCCAGAAGTTTTGGAACATCAGGATTCTGCTGACCCTTCAAAAGCTGTCATTAAACATTTACAACTCAAGTACAAGATTTTACTGGAGCCACAGGAGAAAGAAGAGAACCATGGAGCAACAAAGGCACCAGAGAATCTACAAGTGGCCATTCAAGCTAAGAAGGAGTGGACATTGAGTTGGTTTGACCAGTTCATGGTTCTGTCAAAGAGAACATTCAGAACAAGATGTAAAGACTACTTTGATAAGGTCAGATTAGTTCAAGCACTTGGAGTTGCAGTCTTGCTGGGCCTTCTTTGGTGGAAATCTTCAATCCATACAGAGGCTCAACTCAGAGATCAGGTGGGGCTAATGTTCTATATCTGTATATTCTGGACATCTTCATGTATCTTTGGAGCAGTTTATGTGTTTCCATTTGAAAAGTTATATTTGGTGAAAGAAAGGAAAGCAGACATGTACAGATTAAGCGTATACTATGCATGCAGCACTCTCTGTGATATGGTAGCACATGTGTTCTACCCTACTTTTTTCATGCTTATATTGTACTTCATGGCTGGCTTCAAGAGAACTGTCACTGCCTTCTCCCTCACACTGCTCTCTGTGCTTCTGATAGCCATTACCAGTCAAGGAGCAGGAGAACTATTTGGAGCTGCAATCATGAGTATTCAAAGAGCTGGGATGGTTGCTTCTTTGATCCTAATGCTATTCCTTCTCACTGGTGGCTACTATGTACAGCACATACCAGTGTTCATGAGGTGGTTGAAGTACTTGTCGTTCATGTATTATGGGTTCAGGCTTCTGCTAAAAGTGCAGTACTCAGGAGATGAACTGTATGAGTGTGAAAGCATTGGAGGGTGCAGGACTCTGCAGAGCTCTCCTTCATTCGACACTGTGAACTTGAAAGGAGGTTTGAAAGAAGTATGGGTTCTTCTCGCCATGGCTCTCATCTTTCGTCTCTTTGCTTACCTGTGCCTTCGAATCAGAATTGAAGCCTCCAACCTCTGA 1854 0.4283 MQFEDVEYKVRNSHAVSRLKRTVSKVATQVSENQERYKKILKGITGSIGPGEILALMGPSGSGKTTLLKVIGGRLTDNVKGKVTYNDVGYSSAIKRRIGFVTQDDVLFPQLTVEETLVFSAFLRLPANMSRQQKFERVEAALKDLGLERCRHTKIGGGFIKGISGGERKRTSIGHEILVDPSLLLLDEPTSGLDSSSANRLLLTLHGLAKAGRTIITTIHQPSSRIFHMFDKLLLISEGYPIYYGKARDSMDYFSSLRFIPHIPMNPAEFLLDLATGQVNDISIPEVLEHQDSADPSKAVIKHLQLKYKILLEPQEKEENHGATKAPENLQVAIQAKKEWTLSWFDQFMVLSKRTFRTRCKDYFDKVRLVQALGVAVLLGLLWWKSSIHTEAQLRDQVGLMFYICIFWTSSCIFGAVYVFPFEKLYLVKERKADMYRLSVYYACSTLCDMVAHVFYPTFFMLILYFMAGFKRTVTAFSLTLLSVLLIAITSQGAGELFGAAIMSIQRAGMVASLILMLFLLTGGYYVQHIPVFMRWLKYLSFMYYGFRLLLKVQYSGDELYECESIGGCRTLQSSPSFDTVNLKGGLKEVWVLLAMALIFRLFAYLCLRIRIEASNL 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0954 617 CDD ABCG_EPDR 37 245 - -
Prci8g0954 617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 256 IPR027417 -
Prci8g0954 617 Pfam ABC transporter 41 191 IPR003439 GO:0005524
Prci8g0954 617 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 605 - -
Prci8g0954 617 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 263 IPR003439 GO:0005524
Prci8g0954 617 Gene3D - 22 257 IPR027417 -
Prci8g0954 617 FunFam ABC transporter G family member 22 28 257 - -
Prci8g0954 617 SMART AAA_5 50 241 IPR003593 GO:0016887
Prci8g0954 617 Pfam ABC-2 type transporter 347 555 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0954 Prci-Chr8 6315543 6319452 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0954 39 224 Calmodulin-binding Proteins AT2G36910 30.366 4.43e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0954 K05681 - qsa:O6P43_013516 1028.08