Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0953 ATGGAAATCAGGACGGAGGATGATGAAGGTGATTCTCAGGAGCTGTCTCTGCAGATTTCAGCAGGAAACAATGGCTTTGGTCACAGCATTGAGTTGATGTCTCTGCCTAATTACCTTATCACCAACAATAACAATAGGTTCCCTGACATTGACATTGTGATTGATCATCCCAATCTAAACCGAGATCCACCTCTTCCCATATTTCTCAAGTTTGAAGATGTAGAGTACAAAGTGAGGAATAGTCATGCAGTGTCGAGGTTGAAGAGAACGGTGTCAAAAGTGGCCACACAAGTCAGTGAAAACCAAGAAAGATACAAGAAAATCTTGAAGGGTATTACTGGAAGCATAGGTCCGGGCGAGATTCTTGCTCTCATGGGTCCTTCTGGTAGTGGCAAGACAACCTTGTTGAAGGTCATAGGAGGAAGATTAACTGACAATGTCAAAGGAAAAGTTACTTACAATGATGTTGGATACAGTTCTGCTATCAAGAGAAGAATTGGATTTGTGACACAAGATGATGTTTTGTTTCCACAACTAACAGTGGAAGAAACACTAGTTTTCTCTGCATTCTTAAGGTTACCAGCCAACATGAGCCGACAACAAAAATTTGAGAGAGTGGAGGCAGCCCTAAAAGATCTAGGCCTTGAAAGATGTCGGCACACAAAAATAGGAGGAGGATTTATTAAAGGCATATCAGGAGGGGAAAGGAAGAGAACCAGCATAGGGCATGAGATTCTTGTGGACCCTTCACTGCTTCTACTTGATGAGCCAACTTCTGGCCTTGATTCCTCTTCAGCAAACAGACTTCTGCTCACTCTTCATGGACTTGCCAAGGCTGGAAGGACAATAATCACAACAATTCATCAGCCATCCAGCAGGATCTTTCACATGTTTGACAAACTTCTTCTGATATCAGAAGGCTATCCAATTTACTATGGGAAGGCGAGGGATTCGATGGACTATTTCTCATCCTTGAGGTTCATCCCACACATACCCATGAATCCTGCAGAGTTCTTGCTTGACTTGGCCACTGGACAAGTGAATGATATAAGCATTCCAGAAGTTTTGGAACATCAGGATTCTGCTGACCCTTCAAAAGCTGTCATTAAACATTTACAACTCAAGTACAAGATTTTACTGGAGCCACAGGAGAAAGAAGAGAACCATGGAGCAACAAAGGCACCAGAGAATCTACAAGTGGCCATTCAAGCTAAGAAGGAGTGGACATTGAGTTGGTTTGACCAGTTCATGGTTCTGTCAAAGAGAACATTCAGAACAAGATGTAAAGACTACTTTGATAAGGTCAGATTAGTTCAAGCACTTGGAGTTGCAGTCTTGCTGGGCCTTCTTTGGTGGAAATCTTCAATCCATACAGAGGCTCAACTCAGAGATCAGGTGGGGCTAATGTTCTATATCTGTATATTCTGGACATCTTCATGTATCTTTGGAGCAGTTTATGTGTTTCCATTTGAAAAGTTATATTTGGTGAAAGAAAGGAAAGCAGACATGTACAGATTAAGCGTATACTATGCATGCAGCACTCTCTGTGATATGGTAGCACATGTGTTCTACCCTACTTTTTTCATGCTTATATTGTACTTCATGGCTGGCTTCAAGAGAACTGTCACTGCCTTCTCCCTCACACTGCTCTCTGTGCTTCTGATAGCCATTACCAGTCAAGGAGCAGGAGAACTATTTGGAGCTGCAATCATGAGTATTCAAAGAGCTGGGATGGTTGCTTCTTTGATCCTAATGCTATTCCTTCTCACTGGTGGCTACTATGTACAGCACATACCAGTGTTCATGAGGTGGTTGAAGTACTTGTCGTTCATGTATTATGGGTTCAGGCTTCTGCTAAAAGTGCAGTACTCAGGAGATGAACTGTATGAGTGTGAAAGCATTGGAGGGTGCAGGACTCTGCAGAGCTCTCCTTCATTCGACACTGTGAACTTGAAAGGAGGTTTGAAAGAAGTATGGGTTCTTCTCGCCATGGCTCTCATCTTTCGTCTCTTTGCTTACCTGTGCCTTCGAATCAGAATTGAAGCCTCCAACCTCTGA 2058 0.4281 MEIRTEDDEGDSQELSLQISAGNNGFGHSIELMSLPNYLITNNNNRFPDIDIVIDHPNLNRDPPLPIFLKFEDVEYKVRNSHAVSRLKRTVSKVATQVSENQERYKKILKGITGSIGPGEILALMGPSGSGKTTLLKVIGGRLTDNVKGKVTYNDVGYSSAIKRRIGFVTQDDVLFPQLTVEETLVFSAFLRLPANMSRQQKFERVEAALKDLGLERCRHTKIGGGFIKGISGGERKRTSIGHEILVDPSLLLLDEPTSGLDSSSANRLLLTLHGLAKAGRTIITTIHQPSSRIFHMFDKLLLISEGYPIYYGKARDSMDYFSSLRFIPHIPMNPAEFLLDLATGQVNDISIPEVLEHQDSADPSKAVIKHLQLKYKILLEPQEKEENHGATKAPENLQVAIQAKKEWTLSWFDQFMVLSKRTFRTRCKDYFDKVRLVQALGVAVLLGLLWWKSSIHTEAQLRDQVGLMFYICIFWTSSCIFGAVYVFPFEKLYLVKERKADMYRLSVYYACSTLCDMVAHVFYPTFFMLILYFMAGFKRTVTAFSLTLLSVLLIAITSQGAGELFGAAIMSIQRAGMVASLILMLFLLTGGYYVQHIPVFMRWLKYLSFMYYGFRLLLKVQYSGDELYECESIGGCRTLQSSPSFDTVNLKGGLKEVWVLLAMALIFRLFAYLCLRIRIEASNL 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0953 685 Gene3D - 90 325 IPR027417 -
Prci8g0953 685 Pfam ABC-2 type transporter 415 623 IPR013525 GO:0016020|GO:0140359
Prci8g0953 685 Pfam ABC transporter 109 259 IPR003439 GO:0005524
Prci8g0953 685 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 69 331 IPR003439 GO:0005524
Prci8g0953 685 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 51 673 - -
Prci8g0953 685 SMART AAA_5 118 309 IPR003593 GO:0016887
Prci8g0953 685 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 324 IPR027417 -
Prci8g0953 685 CDD ABCG_EPDR 105 313 - -
Prci8g0953 685 FunFam ABC transporter G family member 22 96 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0953 Prci-Chr8 6315543 6319638 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0953 107 292 Calmodulin-binding Proteins AT2G36910 30.366 7.49e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0953 K05681 - qsa:O6P43_013516 1074.31