Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0949 ATGAATTCTTCGGAAGCAGAGGAACAAACGGTGAGTGTCAGAAACAGGTCAGTTTCTGATTCCTTCATGATTGGGATGGTAATGAGGATTTACAGAGCCAGATGGTTTGTGTTCTTGCGGAGGGTCTTCCAGTACCAAAACGGGTCGAGATCGGATATCGGGTCCAACCCGTTTAACTCGGCCACGTGGATGACAATGGAGCTGGTGGCTCTGATGGTGCAGATAACGGCTTCGACGGCGACGTTGGCGATTTCGCAGGAGGAGAAACCAGTTTGGCCGATGAGATTCTGGATTTTGGGGTATGAAATTGGGTGTGTTCTTAGTTTGTTGCTGCTTTATGGGCGATATCGTCTTCTTCATTTGGATCAATCACTCGTTCTTAGCCTCTCTGATTTGGAACAGCAGAGAGGAAGTGAACAGGATGAGACCAGGGCATGTGCATTGATGAACAAGTGTAGGAGTTCATTGGAACTGATGTTTGGAATATGGTTTGTGATGGGAAATGTGTGGGTGTTTGGGTGTGGCTATGGATCAATCCACAGAGCTCCAAAGCTGCACGTACTCTGCATCTCTCTTCTTGCTTGGAATGCCATCTCCTACTCCTTCCCTTTCATGCTCTTTCTTCTGCTCTGCTGCTTCCTGCCTCTCCTCTGCTCTCTCCTTGGCCACTCCCCTGCTTCCCCTGTTTCCCCTGCTTCTGATCAGCTGATCTCTCTGCTTCCTTCTCGGCCCTATGCTCCTCTCCCTCCTTCCCCTGATTCTCATGATCACTCTCAAGAACACGATGAATGCTGCATTTGCTTGGCCAAATACAAAGAGAAAGAACAAGTTAGAGAGCTTCCTTGTAACCACATCTTCCACCAAAAGTGCGTGGACCAGTGGCTCAGAATCATATCCTGTTGTCCTCTTTGCAAGCAAGGAATAGGGACGTAG 933 0.4855 MNSSEAEEQTVSVRNRSVSDSFMIGMVMRIYRARWFVFLRRVFQYQNGSRSDIGSNPFNSATWMTMELVALMVQITASTATLAISQEEKPVWPMRFWILGYEIGCVLSLLLLYGRYRLLHLDQSLVLSLSDLEQQRGSEQDETRACALMNKCRSSLELMFGIWFVMGNVWVFGCGYGSIHRAPKLHVLCISLLAWNAISYSFPFMLFLLLCCFLPLLCSLLGHSPASPVSPASDQLISLLPSRPYAPLPPSPDSHDHSQEHDECCICLAKYKEKEQVRELPCNHIFHQKCVDQWLRIISCCPLCKQGIGT 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0949 310 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 224 309 IPR013083 -
Prci8g0949 310 Pfam Ring finger domain 262 305 IPR001841 -
Prci8g0949 310 SUPERFAMILY RING/U-box 257 308 - -
Prci8g0949 310 ProSiteProfiles Zinc finger RING-type profile. 264 305 IPR001841 -
Prci8g0949 310 SMART ring_2 264 304 IPR001841 -
Prci8g0949 310 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 10 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0949 Prci-Chr8 6295788 6299419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0949 3 308 C3H Transcription Factor Family AT4G26580 59.416 5.55e-124 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0949 - - gmx:100813670 360.918