Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0948 ATGAAGCAGCTAAAACTTGAACCTTTAATTTTAACACTTGTGGTGGCGGTCACCGCTGCAGCGAATGATGCTAGCACTAGCGCAGAATTATTCATTTCGTGGAAAGACCTAATAGTGACGCGAAATGACATCAAGAGTGGTAGAGCTATCGTGGTTGATCAAAACGGACGTGGAAATTCAATCACAATTCAAGGAGCTGTAGATTTGATCCCTGCCAACAATGAATCACGAATGAAAATCCTTGTTTATACTGGAACTTACAATGAAACAGTGGAAATACCAGCAAACAAGTCGTATGTATCAATCATCGGAAGACCAAATACAAGAAATGGCGATTTCCCAGTGATCACAAGTTGTCGAAAGGCGTCTGATACAGATCAGTCTGGGAACATGTTAGGAAGCATGAATACTGCAACCGTTCTGGTTCAATCCAACTATTTTGTTGCTGCCGCTCTAACCATTGAGAATAGTGCAGTTCCAAGTGGGCATGGAGATCAAGCATTGGCGATAAGAATAGACGGAGATAAATCTGTGTTTTACAAAGTGAGGTTCTTAGGGTATCAAGACACTCTTATGGATAATATTGGAACTCATTTATTTTATCATTGTTACATTGAAGGAAGCATCGATTTCATCTGTGGAAGTGCCACATCGTTGTATCAGGACTGTACAATAAACTCAACAAGAGCAGGAGCAATAGCAGCACACGAAAGGAACACAGAAGATGATTCAGGTTTTATCTTTGAGGATTGCAAAATCCTAGGAACTGGACCCACCATTCTTGGGCGAGCTTGGGGCAATTATTCCAGAATCATATATTCCTTCTGCACATTCCACAATATCATCGACCCTGTAGGCTGGAGTGATTGGGATAATCCCTACAAACAGAACACCTCCTTTTTCGGAGAGTACATGAATCAGGGACCTGGATCAAACAGAATTGGAAGAGCTTCATGGTCCAAATCTTTGTCAGATGATCAAGCAATTCGATATGTCGGTAGAACCTTCATCAAAGGACACGATTGGCTTAAAATATAG 1038 0.4123 MKQLKLEPLILTLVVAVTAAANDASTSAELFISWKDLIVTRNDIKSGRAIVVDQNGRGNSITIQGAVDLIPANNESRMKILVYTGTYNETVEIPANKSYVSIIGRPNTRNGDFPVITSCRKASDTDQSGNMLGSMNTATVLVQSNYFVAAALTIENSAVPSGHGDQALAIRIDGDKSVFYKVRFLGYQDTLMDNIGTHLFYHCYIEGSIDFICGSATSLYQDCTINSTRAGAIAAHERNTEDDSGFIFEDCKILGTGPTILGRAWGNYSRIIYSFCTFHNIIDPVGWSDWDNPYKQNTSFFGEYMNQGPGSNRIGRASWSKSLSDDQAIRYVGRTFIKGHDWLKI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0948 345 Gene3D - 44 345 IPR012334 -
Prci8g0948 345 SUPERFAMILY Pectin lyase-like 46 344 IPR011050 -
Prci8g0948 345 Pfam Pectinesterase 50 339 IPR000070 GO:0030599|GO:0042545
Prci8g0948 345 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 43 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0948 Prci-Chr8 6290170 6292550 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0948 1 296 Carbohydrate Esterase AT5G55590 46.246 7.80e-89 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0948 K01051 - qsa:O6P43_021291 330.872