Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0947 ATGAGCAAATCATCTGTTAAATTGGTGATTCTGTTACTTGTAGCGACAATAGCTACGGTAGGAGCCGATCTCCCTCGAAAGGGATATATCGAGTGGCAAGATTTCGTGGTCACGCCAGCCGACTTAAGAAAGGGCAGAGTCATCGTGGTTGATAAGAGTGGCACAGGAGACTCAACTACAATTCAAGGGGCTCTTAATCTAATTCCAGACAGCTACAACGCCAGAATTAAGATTGTTATTAATCCCGGAATTTACGATGAAATATTAAGTATACCACAAAACAAGTCTCATATTTCATTCATAGGAAGACCAAGTCAACCAGATGGCTACTACCCTTTGATCACTGGTTCTCGAAAAGCGTCTGATAAAGATGAAAATGGCCACGAAATAGGAAGCGTTAATACTGCGACTCTTGAGGTTCTATCTGATTATTTTGTTGCCACGGCCATTACTGTTCGGAACAATGCGGTTGCAACTGGGTATGGAGATCAAGCAGCAGCAATAAGAATAGATGGAGACAAAGCAATGTTCTATAGAGTGACCTTCTTGGGGAATCAAGACACTCTTTTAGATGACTTCGGAACTCACTTCTTTTATCATTGTTACATTGAAGGATCTGTTGATTTCATCTGGGGCACTGCCACGTCATTGTACGAGGATTGCACAATACATTCAACACGATCATCAGGGTCAATAACGGCACATGATAGGCAAGAAGCAGATGACAATACAGGCTATATTTTTCAAGGTTGCAAAATCCAAGGGAATGGACCCACCGTTCTTGGGAGGGCTTGGGGCAGATATTCGAGAGTCATATATGCATTTTGCACTATGGACGACATGATTGACCCTTTGGGCTGGAATAACATGGATGATCCCTCGAAAGAAAGCACTGTCATGTTTGGAGAGTACATGAACGAGGGACCTGGATCGAATAGGAATGGAAGACTTCCATGGTCACAAGCTCTGTCAGATGCTCAAGCATTGAGATTCGTTGGCAGGACTTTTATCAATGGATCTGAATGGCTTCGATTATGA 1038 0.4287 MSKSSVKLVILLLVATIATVGADLPRKGYIEWQDFVVTPADLRKGRVIVVDKSGTGDSTTIQGALNLIPDSYNARIKIVINPGIYDEILSIPQNKSHISFIGRPSQPDGYYPLITGSRKASDKDENGHEIGSVNTATLEVLSDYFVATAITVRNNAVATGYGDQAAAIRIDGDKAMFYRVTFLGNQDTLLDDFGTHFFYHCYIEGSVDFIWGTATSLYEDCTIHSTRSSGSITAHDRQEADDNTGYIFQGCKIQGNGPTVLGRAWGRYSRVIYAFCTMDDMIDPLGWNNMDDPSKESTVMFGEYMNEGPGSNRNGRLPWSQALSDAQALRFVGRTFINGSEWLRL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0947 345 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 39 344 - -
Prci8g0947 345 Pfam Pectinesterase 48 339 IPR000070 GO:0030599|GO:0042545
Prci8g0947 345 SUPERFAMILY Pectin lyase-like 45 343 IPR011050 -
Prci8g0947 345 Gene3D - 46 345 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0947 Prci-Chr8 6286430 6288068 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0947 9 296 Carbohydrate Esterase AT5G55590 45.110 1.32e-86 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0947 K01051 - zju:107403317 335.495