Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0938 ATGCCTGTAAGCTTAAGAAATCCTTCACTTTCTCCCAGATTCTCCTCCCTCACCTTACTTCTCTCCATAAACTCTCTCCTCCTCTTCTTCTCATGTTGCTACTCCGTTGAAGAACAAGGACAAACTCTTCTTGCATGGAAGAACAGTTTGAACAGTACAGAGGATGCCTTATTAGCATCCTGGAATCCTTCAGATTCAAGCCCTTGCAAATGGGTTGGTGTTCGCTGCAACTCCAGAGGGGATGTGGAGGAGATAAGCTTGAAATCTGTGGACCTGAAAGGCTCATCATTGCCTTTAAATTTTCAAGCTCTCGAGTCTTTGAAGGTTCTTGACCTGTCATCAACCAACCTCACAGGTTCTATTCCAAGAGAGATTGGAGACTATGGAGAGCTTGTTTCTATTGATCTCAGTGGGAATTTTCTCTCTGGTGAAATACCAGAAGATATTTGCAGGCTGAGAAAACTTGAGAGTTTGTCTTTACATACAAACTTTCTTGAAGGTAATATTCCATCCAACATTGGGAATCTCTCCAGTCTTGTGAATTTGACTTTGTATGACAACCATCTCAGCGGTGCAATCCCGAAGAGTCTGGGGTCTTTAAGGAGGCTTCAAGTTTTCAGAGCTGGTGGGAATAAGAACCTTAAAGGTGAGCTGCCATGGGAGATTGGAAACTGCACCAGCTTGGTCATGTTGGGCCTTGCAGAAACCAGCATTTCTGGGAGCCTTCCTTCTTCAATAGGAATGCTGAAGAACATTCAAACCATAGCTATTTACACAACTCTCTTGTCAGGCTCAATTCCTAATGAAATTGGGAATTGCAGTGAGCTGCAGAATTTGTACTTGTATCAGAACTCTATTTCAGGTCCAATCCCAAGTCAAATTGCGAATCTCAGAAAGCTTCGGAGTATTCTCTTATGGCAGAACAGTCTAGTGGGTACAATCCCAGAAGAGCTTGGAAGCTGCACAGAGCTCAGAGTTGTAGACTTTTCAGAAAACCTCCTCACTGGAAGCATACCAAGGAGCTTTGGGATGCTTTCAAATATTGAGGAAATCCAGCTTAGTGTTAATCGGTTGACAGGTACTATACCTCCTGAGATTACAAATTGCACTCTGACTCAGTTGGAAGTTGACAACAATGCTCTTTTTGGAGAGATTCCTGCTCTCATAGGCAACTTGAAAAGCTTGAATCTGTTCTTTGCATGGCAGAACAAGCTCACTGGGAAAATCCCAGAGAGTCTGTCTGAGTGCCAAGATCTTGACGCACTTGACCTGTCTTACAATAATCTGATTGGTTCAATACCAAAATCTCTCTTTGGGTTGAGGAATCTCACTAAACTCTTGCTTATTTCTAATGAACTATCAGGCTTTGTTCCTCCTGATATAGGAAACTGCACTAGTCTCTTCAGGTTAAGGTTGAACCGGAATAGATTTGCAGGGTCCATTCCACCTGAGATAGGAAACTTGAAGAATCTCAATTTTATGGATATGAGCAACAATCACTTTGTGGGGGAGATTCCTCCAACATTATCTGGATGCGAGAACCTTGAGTTTATTGACTTGCATTCAAATTCTCTCACAGGCTCTCTCCCAGAGACTCTCCCAAGAAGTCTTCGATTAATAGATTTCTCGGACAATAGGCTCACTGGCCTGCTGAGTCGTTCCATTGGTTCGTTAACTGAACTGACCAAACTCAATCTGGGAAAGAATCAACTCAGTGGAACAATGCCAGAAGAGATCTCGTCTTGCTCTAAGCTTCAACTTCTAGACCTGGGAAGCAACGATTTCTCAGGAGAAATTCCAAAGCAATTGGGCCAAATCCCATCATTGGAAATCTCTTTAAATCTCAGCTTCAATCAATTTTCTGGCCAAATCCCATCTCAAGTCTCTGGTCTCACAAAACTGGGTGTACTTGATCTCTCCCACAACCACCTCTCAGGGAACCTGAACTCTCTCTCTGACCTTCAAAACCTCGTATCCTTAAACGTCTCCTTCAACGACTTCTCTGGTGAATTACCCGACACCCCATTTTTCAAAAGGCTGCCTTTAAGTGACCTCACCCCAAATAAAGGCCTCTACATCTCCGGCGCCGACGGTTTGACTCCGGTCGACAGAGTGGGACCCAGTAAAGTCCATGGCAGATCAGCAATGATCATCATGTCCATTCTCCTAAGCACAAGTGCAGTACTCGTACTTCTCACAGTCTATGCCTTGGTACGTTCTCATATCCGAAACAGAGCGATCATAGAAGATAGCTCATGGGAGATGACTTTTTATCAGAAGCTCGAAATCTCCTCCATTGATGATGTCATCAAGAGCCTGACGTCATCCAACGTGATCGGCACCGGAAGCTCCGGGGTGGTGTACAAGGTAACAATCCCCAATAGCTCCATCGGCGAACTAGCAGTTAAGAAAATGTGGTCATCAGAAGAATCCGGAGCGTTCGAGTCCGAGATTCGAACTCTGGGTTCAATCCGACACAAGAACATCGTGAGACTTCTAGGATGGGGATCCAACAAGAACCTCAAGCTTCTGTTCTACGACTACCTCCCCAACGGCAGCCTGAGCTCGATGCTTCACGGTTCCGGAAAAGGAAGCGCGGATTGGGAAACCAGGTACGAGGTTGTGGTGGGTGTGGCTCACGCGCTGGCTTATTTACACCACGATTGCCTCCCTCCAATACTTCACGGAGACGTGAAGGCCATGAACGTGTTACTGGACGACAGGTTTCAAGCTTATCTTGCAGATTTTGGCCTGGCCAGGATTGTTCATGAAAAAGACGACGCTCATGATCATTTTGATCCAAAACCACTTCATAGAACATATCTTGCTGGTTCTTACGGATACATGGCTCCAGAACATGCATCGATGCAGAGAATCACAGAGAAGAGTGACGTGTATAGTTATGGTGTGGTTCTGTTGGAAGTGTTGACTGGGAAGCACCCACTAGACCCAACGTTGCCAGGTGGCGCACACATGGTTCAGTGGGTTCGGGACCACTTAGCCAATAAGGGCGGGCCGTCTGATATTCTGGACCCAAAGCTCAGAGGGAGGGCTGACCCAGCGATGCATGAGATGGTTCAGACTCTGGCAGTGTCGTTCCTGTGCGTGAGCACCAAGCCTGAGGATCGCCCTACGATGAAGGACGTTGTGGCGATGCTGAAGGAAATCAGAGCTGTTGAATCCTCGAGGTTGGATTGTGATGAACTGAAGAAGGGCAAAATCATCTTACATAAAGGATCGCCGTATCCTGTTCCGCCACCTGAGCGTCTGCTTTCGTCGCATGAATCTTCTAATTGTTCCTTTCATTTCTCAGATGACTCGGTCTAA 3327 0.4581 MPVSLRNPSLSPRFSSLTLLLSINSLLLSXFSCCYSVEEQGQTLLAWKNSLNSTEDALLASWNPSDSSPCKWVGVRCNSRGDVEEISLKSVDLKGSSLPLNFQALESLKVLDLSSTNLTGSIPREIGDYGELVSIDLSGNFLSGEIPEDICRLRKLESLSLHTNFLEGNIPSNIGNLSSLVNLTLYDNHLSGAIPKSLGSLRRLQVFRAGGNKNLKGELPWEIGNCTSLVMLGLAETSISGSLPSSIGMLKNIQTIAIYTTLLSGSIPNEIGNCSELQNLYLYQNSISGPIPSQIANLRKLRSILLWQNSLVGTIPEELGSCTELRVVDFSENLLTGSIPRSFGMLSNIEEIQLSVNRLTGTIPPEITNCTXLTQLEVDNNALFGEIPALIGNLKSLNLFFAWQNKLTGKIPESLSECQDLDALDLSYNNLIGSIPKSLFGLRNLTKLLLISNELSGFVPPDIGNCTSLFRLRLNRNRFAGSIPPEIGNLKNLNFMDMSNNHFVGEIPPTLSGCENLEFIDLHSNSLTGSLPETLPRSLRLIDFSDNRLTGLLSRSIGSLTELTKLNLGKNQLSGTMPEEISSCSKLQLLDLGSNDFSGEIPKQLGQIPSLEISLNLSFNQFSGQIPSQVSGLTKLGVLDLSHNHLSGNLNSLSDLQNLVSLNVSFNDFSGELPDTPFFKRLPLSDLTPNKGLYISGADGLTPVDRVGPSKVHGRSAMIIMSILLSTSAVLVLLTVYALVRSHIRNRAIIEDSSWEMTFYQKLEISSIDDVIKSLTSSNVIGTGSSGVVYKVTIPNSSIGELAVKKMWSSEESGAFESEIRTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSMLHGSGKGSADWETRYEVVVGVAHALAYLHHDCLPPILHGDVKAMNVLLDDRFQAYLADFGLARIVHEKDDAHDHFDPKPLHRTYLAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGKHPLDPTLPGGAHMVQWVRDHLANKGGPSDILDPKLRGRADPAMHEMVQTLAVSFLCVSTKPEDRPTMKDVVAMLKEIRAVESSRLDCDELKKGKIILHKGSPYPVPPPERLLSSHESSNCSFHFSDDSV 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0938 1110 Gene3D Phosphorylase Kinase; domain 1 737 850 - -
Prci8g0938 1110 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 213 338 - -
Prci8g0938 1110 SUPERFAMILY L domain-like 36 312 - -
Prci8g0938 1110 Pfam Protein kinase domain 778 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0938 1110 Pfam Leucine rich repeat N-terminal domain 38 78 IPR013210 -
Prci8g0938 1110 Pfam Leucine rich repeat 537 597 IPR001611 GO:0005515
Prci8g0938 1110 ProSitePatterns Serine/Threonine protein kinases active-site signature. 895 907 IPR008271 GO:0004672|GO:0006468
Prci8g0938 1110 SMART LRR_typ_2 490 514 IPR003591 -
Prci8g0938 1110 SMART LRR_typ_2 633 656 IPR003591 -
Prci8g0938 1110 SMART LRR_typ_2 105 129 IPR003591 -
Prci8g0938 1110 SMART LRR_typ_2 442 466 IPR003591 -
Prci8g0938 1110 SMART LRR_typ_2 298 322 IPR003591 -
Prci8g0938 1110 SMART LRR_typ_2 346 370 IPR003591 -
Prci8g0938 1110 SMART LRR_typ_2 153 177 IPR003591 -
Prci8g0938 1110 SMART LRR_typ_2 560 584 IPR003591 -
Prci8g0938 1110 FunFam Putative LRR receptor-like serine/threonine-protein kinase 759 850 - -
Prci8g0938 1110 ProSitePatterns Protein kinases ATP-binding region signature. 781 806 IPR017441 GO:0005524
Prci8g0938 1110 FunFam Leucine-rich receptor-like protein kinase family protein 341 613 - -
Prci8g0938 1110 FunFam Leucine-rich receptor-like protein kinase family protein 37 200 - -
Prci8g0938 1110 ProSiteProfiles Leucine-rich repeat profile. 635 657 IPR001611 GO:0005515
Prci8g0938 1110 Gene3D Ribonuclease Inhibitor 539 613 IPR032675 -
Prci8g0938 1110 Gene3D Ribonuclease Inhibitor 614 697 IPR032675 -
Prci8g0938 1110 Gene3D Ribonuclease Inhibitor 37 197 IPR032675 -
Prci8g0938 1110 SUPERFAMILY RNI-like 291 667 - -
Prci8g0938 1110 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 295 1050 - -
Prci8g0938 1110 FunFam Putative LRR receptor-like serine/threonine-protein kinase 614 699 - -
Prci8g0938 1110 SUPERFAMILY Protein kinase-like (PK-like) 758 1055 IPR011009 -
Prci8g0938 1110 Gene3D Ribonuclease Inhibitor 198 409 IPR032675 -
Prci8g0938 1110 ProSiteProfiles Protein kinase domain profile. 775 1058 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0938 1110 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 851 1073 - -
Prci8g0938 1110 SMART serkin_6 775 1028 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0938 1110 Gene3D Transferase(Phosphotransferase) domain 1 851 1076 - -
Prci8g0938 1110 Gene3D Ribonuclease Inhibitor 410 538 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0938 Prci-Chr8 6240407 6244502 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0938 34 1110 Receptor kinase-like Gene Family AT5G56040 66.728 0.0 1420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci8g0938 Pkinase 7.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0938 - - gmx:100802880 1608.58