Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0935 ATGTATAAACAACCTTTTGTCATAGGTGTTGCTGGGGGAGCTGCATCTGGGAAGACCACAGTTTGTGATATGATTATTCAGCAGCTTCATGACCAACGAGTTGTGCTTGTTACTCAGGATTCTTTTTATCATAATTTGACTGAAGAGGAACTTATGAGAGTCCAAGATTACAACTTTGACCATCCTGATGCTTTTGATACCGAGCAATTATTATGGGTTATGGACAAGTTAAAGCACGGACAAGCTGTAGATATTCCAAACTATGACTCGAAGAGTTACAAGAGTGATGTGTTTAGAACAAGAAGGGTGAATCCTTCAGATGTTATAATTTTGGAAGGAATTCTTATTTTCCATGATCCACGTGTCCGGGAGCTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGTTTGGCTAGGAGAATTAGGCGTGATACTCGTGAGAAGGCTCGGGATATTGGCTTGGTGCTTGATCAGTATTCTAAATTTGTAAAGCCGGCTTTTGATGACTTTATTCTTCCAACAAAGAAATATGCTGATATCATTATACCCCGTGGAGGAGATAATCATGTGGCCATTGATTTGATCGTACAGCATATCCGAACAAAGCTTGGTCAGCATGATCTGTGTAAAATATATCCTAATTTATATGTCATTCAATCAACTTTCCAGATAAGGGGTATGCATACCCTGATACGTGATTCTCAGACAACGAAGCATGATTTTGTATTTTATTCTGACCGTTTGATTCGTTTGGTTGTTGAACATGGCCTGGGGCACCTTCCATTTACAGAAAAGCAAGTAATAACTCCAACTGAGTCTGTATATACTGGTGTGGATTTTTGCAAGAGGTTATGTGGTGTCTCCGTTATCAGGAGTGGAGAGAGTATGGAGAATGCTTTACGTGCATGCTGTAAGGGTATCAAGATTGGCAAAATTCTTATTCATAGAGAAGGTGACAATGGTCAGCAGCTCATATATGAGAAGTTGCCTAACGATATCTCAGATAGACACGTGTTGCTATTGGATCCTATCCTAGGAACAGGTAATTCTGCTGTTCAAGCAATTTCTTTGCTTATCAGAAAGGGTGTACCAGAGTCCAACATAATATTTCTCAATCTCATATCAGCACCTCAAGGTGTGCATGTGGTCTGCAAAAGATTTCCAAGAATAAAAATCGTGACATCCGAGATTGATTTTGGTTTGAATGAAGATTTCCGCGTTGTGCCTGGAATGGGTGAGTTTGGGGACCGTTATTTTGGAACTGACGACGACGACGACGACCAACGGATGGTGGCCCCTCAAGAAAAGTGA 1320 0.4045 MYKQPFVIGVAGGAASGKTTVCDMIIQQLHDQRVVLVTQDSFYHNLTEEELMRVQDYNFDHPDAFDTEQLLWVMDKLKHGQAVDIPNYDSKSYKSDVFRTRRVNPSDVIILEGILIFHDPRVRELMNMKIFVDTDADVRLARRIRRDTREKARDIGLVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDSQTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTESVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLIRKGVPESNIIFLNLISAPQGVHVVCKRFPRIKIVTSEIDFGLNEDFRVVPGMGEFGDRYFGTDDDDDDQRMVAPQEK 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0935 439 Gene3D - 209 424 IPR029057 -
Prci8g0935 439 PANTHER URIDINE KINASE 5 334 - -
Prci8g0935 439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 198 IPR027417 -
Prci8g0935 439 Pfam Phosphoribulokinase / Uridine kinase family 7 193 IPR006083 GO:0005524|GO:0016301
Prci8g0935 439 PRINTS Uridine kinase signature 80 95 - -
Prci8g0935 439 PRINTS Uridine kinase signature 5 22 - -
Prci8g0935 439 PRINTS Uridine kinase signature 173 186 - -
Prci8g0935 439 PRINTS Uridine kinase signature 137 147 - -
Prci8g0935 439 PRINTS Uridine kinase signature 35 46 - -
Prci8g0935 439 PRINTS Uridine kinase signature 151 162 - -
Prci8g0935 439 Gene3D - 2 208 IPR027417 -
Prci8g0935 439 CDD PRTases_typeI 282 397 IPR000836 -
Prci8g0935 439 FunFam Uridine kinase 209 424 - -
Prci8g0935 439 FunFam Uridine kinase 2 208 - -
Prci8g0935 439 NCBIfam uridine kinase 4 205 IPR000764 -
Prci8g0935 439 CDD UMPK 7 205 IPR000764 -
Prci8g0935 439 Pfam Uracil phosphoribosyltransferase 223 424 - -
Prci8g0935 439 SUPERFAMILY PRTase-like 208 425 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0935 Prci-Chr8 6221527 6228789 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0935 3 427 PRT Gene Family AT4G26510 89.647 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0935 K00876 - rcu:8262266 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0935 8 6221527 6228789 Prci2g2376 2 18853610 18862362 CCT