Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0934 ATGGAGTCATCCTCTGAGGTTCATTTTTCTGGATTTCACATGAATGGTTCAGCGCAGAGGAATGCTGGCACGGAGCAACCTACAACTTCAGCCACTGACATGTATAAACAACCTTTTGTCATAGGTGTTGCTGGGGGAGCTGCATCTGGGAAGACCACAGTTTGTGATATGATTATTCAGCAGCTTCATGACCAACGAGTTGTGCTTGTTACTCAGGATTCTTTTTATCATAATTTGACTGAAGAGGAACTTATGAGAGTCCAAGATTACAACTTTGACCATCCTGATGCTTTTGATACCGAGCAATTATTATGGGTTATGGACAAGTTAAAGCACGGACAAGCTGTAGATATTCCAAACTATGACTCGAAGAGTTACAAGAGTGATGTGTTTAGAACAAGAAGGGTGAATCCTTCAGATGTTATAATTTTGGAAGGAATTCTTATTTTCCATGATCCACGTGTCCGGGAGCTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGTTTGGCTAGGAGAATTAGGCGTGATACTCGTGAGAAGGCTCGGGATATTGGCTTGGTGCTTGATCAGTATTCTAAATTTGTAAAGCCGGCTTTTGATGACTTTATTCTTCCAACAAAGAAATATGCTGATATCATTATACCCCGTGGAGGAGATAATCATGTGGCCATTGATTTGATCGTACAGCATATCCGAACAAAGCTTGGTCAGCATGATCTGTGTAAAATATATCCTAATTTATATGTCATTCAATCAACTTTCCAGATAAGGGGTATGCATACCCTGATACGTGATTCTCAGACAACGAAGCATGATTTTGTATTTTATTCTGACCGTTTGATTCGTTTGGTTGTTGAACATGGCCTGGGGCACCTTCCATTTACAGAAAAGCAAGTAATAACTCCAACTGAGTCTGTATATACTGGTGTGGATTTTTGCAAGAGGTTATGTGGTGTCTCCGTTATCAGGAGTGGAGAGAGTATGGAGAATGCTTTACGTGCATGCTGTAAGGGTATCAAGATTGGCAAAATTCTTATTCATAGAGAAGGTGACAATGGTCAGCAGCTCATATATGAGAAGTTGCCTAACGATATCTCAGATAGACACGTGTTGCTATTGGATCCTATCCTAGGAACAGGTAATTCTGCTGTTCAAGCAATTTCTTTGCTTATCAGAAAGGGTGTACCAGAGTCCAACATAATATTTCTCAATCTCATATCAGCACCTCAAGGTGTGCATGTGGTCTGCAAAAGATTTCCAAGAATAAAAATCGTGACATCCGAGATTGATTTTGGTTTGAATGAAGATTTCCGCGTTGTGCCTGGAATGGGTGAGTTTGGGGACCGTTATTTTGGAACTGACGACGACGACGACGACCAACGGATGGTGGCCCCTCAAGAAAAGTGA 1419 0.4101 MESSSEVHFSGFHMNGSAQRNAGTEQPTTSATDMYKQPFVIGVAGGAASGKTTVCDMIIQQLHDQRVVLVTQDSFYHNLTEEELMRVQDYNFDHPDAFDTEQLLWVMDKLKHGQAVDIPNYDSKSYKSDVFRTRRVNPSDVIILEGILIFHDPRVRELMNMKIFVDTDADVRLARRIRRDTREKARDIGLVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDSQTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTESVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLIRKGVPESNIIFLNLISAPQGVHVVCKRFPRIKIVTSEIDFGLNEDFRVVPGMGEFGDRYFGTDDDDDDQRMVAPQEK 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0934 472 NCBIfam uridine kinase 37 238 IPR000764 -
Prci8g0934 472 CDD UMPK 40 238 IPR000764 -
Prci8g0934 472 Gene3D - 34 241 IPR027417 -
Prci8g0934 472 FunFam Uridine kinase 242 457 - -
Prci8g0934 472 Pfam Phosphoribulokinase / Uridine kinase family 40 226 IPR006083 GO:0005524|GO:0016301
Prci8g0934 472 FunFam Uridine kinase 35 241 - -
Prci8g0934 472 Gene3D - 242 457 IPR029057 -
Prci8g0934 472 SUPERFAMILY PRTase-like 241 458 IPR029057 -
Prci8g0934 472 Pfam Uracil phosphoribosyltransferase 256 457 - -
Prci8g0934 472 CDD PRTases_typeI 315 430 IPR000836 -
Prci8g0934 472 PANTHER URIDINE KINASE 34 367 - -
Prci8g0934 472 PRINTS Uridine kinase signature 184 195 - -
Prci8g0934 472 PRINTS Uridine kinase signature 68 79 - -
Prci8g0934 472 PRINTS Uridine kinase signature 206 219 - -
Prci8g0934 472 PRINTS Uridine kinase signature 113 128 - -
Prci8g0934 472 PRINTS Uridine kinase signature 38 55 - -
Prci8g0934 472 PRINTS Uridine kinase signature 170 180 - -
Prci8g0934 472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 231 IPR027417 -
Prci8g0934 472 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0934 Prci-Chr8 6221502 6228789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0934 1 460 PRT Gene Family AT4G26510 84.848 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0934 K00876 - gmx:100798205 837.41