Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0921 ATGACTGGACGTCCCAATCTTGTTTCGGATGAGACACGGGATAGAAAAGATGAATTAAAAGAGTGGGTGAAGCAAGTGAGAGAAGTTGCTTTTCGCATGGAAGATGTGATCGATGAATTCTTGTTGAAAGTGAAAAAGCATGACCAAAAGCAACGACTTGTTCGCTTTGTTGCTAAAACTGGTAACGTTCTCAAAACTGTCAAAGTCCGTCTTAAGATACAAGCGGAGATTCGGGACATCAAAAAAACACGAGAAAGACTCGATAAATTAAAAGATTCTTTCGGATTAGACACGTCATCGTCAGGACGGAGAGCAGAGATGTCTGCAACTGCCGGACATGGCCTTCGAAAGAGTGCTCGGTTCATGGATGAAGCTGAACTTGTGGGTGTTGACGAGACTAGGGAAATGCTCATGGGTTGGCTAAGAAAACAAAATGGACGCACAGCAGTAATTTCAGTGGTCGGCGAAGGGGGATTAGGAAAAACCACTATTGTGAGTAACTTGTATAAGAAGCAAAAAGACGAAAGATATTTTGACTGTTACGCTTGGATCAATGTCTCTCACTCACTCGAAGCCAAAGGACTATTAAGAACTATGATCCGTGATTTCGACAAAAATGCTACCATGAAAATTGAAGACGACATGGAACAACATGAGTTGACTGAGAAACTTAAACAATACTTGCAAACAAAGAAGTATATGATTGTTTTTGATGATGTACGGGACATCAACTTTTGGGGAAATTTTCTTAATGCATTACCAGAGGCAGATAAAGGCAAAGACAGCAGGGTAATAATTACAGCAAGAAATATAGACGTTGCAGAAAATTGCAGAGTTCGCAGGGCTGACCATCACATTCATGAGCTAAAACCCTTAGATCCAAAAGTTGCTTTAAAGCTCTTTTACAGTGAGGTCTTTGATTCTAAAGGTTGTGACGATCAAGAGCTGAAAAAATTGTCTGAAGATTTCGTGAGCAAGTGTAATGGAGTGCCATTAGCAATTGTAGCTCTCGCGAGTCTCTTATCAACTAAAAAGGAAGATGTCTCAGAATGGGAAAAGGTGCGCTGGAGTCTAAACTTAAAATTCATAAATAATCCCCATTTAAGAAGTTATTTCCAAGTGTTATCAGAGAGTTACGACGATCTTGATCACCACCTCAAGTCATGCCTCTTGTACTTTGGTCTTTTTCCGGAAGGTTATGCCATTAGTTCCACTCGACTCATCAATTTGTGGACAGAAGAGGGTTGCCTAAATCATGATGATGGTGATCAAGTAAGGACTGAGGAAGTAGCGGAAAGTTACTTGTGTGAACTAATTAATCGCAGCTTGGTTAAAGTATCGGAAAGGGATCCTGATGGCAGAGTTCGAAGATGTCACATCCATGATTTAATGCACGAATTTCTTCTCAAGAAGTGTGAGGATCTGGACTTTGGCCAAGTCATAAAAAGTGGGCAGTTTCAGTTTCATCCATGGACCAGGCGGCTGTCGATCCTCACAAATAGCATTCATGATGATATTACAAGGGCTGCAAATCACAAGAGAGTGAGGTCTTGCTTTTGTTTTAACTTACAAGAGTTGCAAAAGCCTCTGGTGCAATCATTTCTATCCAGCTTCAAGTTCTTGAAAACCCTGGACTTTGAAGATGCTCCTCTCGATCATCTTCCTAAAGCCGTCGGGACTTTGCTGCATCTACAGTATCTGAATCTAAGGAACACGCGGATCACAACCATTCCTAAGTTTATTTGTAAGCTTCTTAATCTAGAGATTCTGAACCTAAAGCATACTCTAGTAACAGAGCTGCCACCATATATTTACCGGCTTGTCAAGTTGCGTCATCTCATAGCATATTCATCTTCTCATGGAGTAATACTAAAGAAAGGCATCAAGAGTTTAAAGGCTCTGCAGAAGCTAGCAAAAGTTGATGCATCTAATGGTGAGGATGGTGTCATCGAGGAATTGATTGACATGAAGGAAATGAGGAGGCTGGGCATTATTAACATAAGGAGGCAACACGGGAGACTGCTATGTACTGCAATAGAGAATATGCAGCTTGTTTGCTCATTAAGTATTGCAGCACCATATGCCGGTGGGATCAGTGAAGTTCTTAGTTTGGGTTCCATAAACAACCCTCCTGAGGACTTGAAACGTCTTTACTTGGTTGGCCGCTTAGAGAAATTAGCAAATTGGATTCCCAGACTTGGCCGGCTAGTGAAGCTCCGACTGGCTTGGTCAGGAATAGAAGAAGACCCAATGCTTGCTCTCAAGGACTTAACAGATTTGGTGGATCTTCAGTTATTGAAATCAGCATACGATGGCGAGGAGTTACACTTCAAAAGTGGATGGTTTAAGAAGCTTAAGGTTTTGGAATTACGTGGCATGCAGAGGCTTAGGAGGTTAAGAATAGAGTCCGCAGCAATGTCTTCGCTGGAACATCTACAACTTGGGTCTTGCCATCAGATGGAAAAGGTGCCCAGTGATATTCAAACCTAA 2490 0.4165 MTGRPNLVSDETRDRKDELKEWVKQVREVAFRMEDVIDEFLLKVKKHDQKQRLVRFVAKTGNVLKTVKVRLKIQAEIRDIKKTRERLDKLKDSFGLDTSSSGRRAEMSATAGHGLRKSARFMDEAELVGVDETREMLMGWLRKQNGRTAVISVVGEGGLGKTTIVSNLYKKQKDERYFDCYAWINVSHSLEAKGLLRTMIRDFDKNATMKIEDDMEQHELTEKLKQYLQTKKYMIVFDDVRDINFWGNFLNALPEADKGKDSRVIITARNIDVAENCRVRRADHHIHELKPLDPKVALKLFYSEVFDSKGCDDQELKKLSEDFVSKCNGVPLAIVALASLLSTKKEDVSEWEKVRWSLNLKFINNPHLRSYFQVLSESYDDLDHHLKSCLLYFGLFPEGYAISSTRLINLWTEEGCLNHDDGDQVRTEEVAESYLCELINRSLVKVSERDPDGRVRRCHIHDLMHEFLLKKCEDLDFGQVIKSGQFQFHPWTRRLSILTNSIHDDITRAANHKRVRSCFCFNLQELQKPLVQSFLSSFKFLKTLDFEDAPLDHLPKAVGTLLHLQYLNLRNTRITTIPKFICKLLNLEILNLKHTLVTELPPYIYRLVKLRHLIAYSSSHGVILKKGIKSLKALQKLAKVDASNGEDGVIEELIDMKEMRRLGIINIRRQHGRLLCTAIENMQLVCSLSIAAPYAGGISEVLSLGSINNPPEDLKRLYLVGRLEKLANWIPRLGRLVKLRLAWSGIEEDPMLALKDLTDLVDLQLLKSAYDGEELHFKSGWFKKLKVLELRGMQRLRRLRIESAAMSSLEHLQLGSCHQMEKVPSDIQT 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0921 829 Coils Coil 73 93 - -
Prci8g0921 829 PRINTS Disease resistance protein signature 150 165 - -
Prci8g0921 829 PRINTS Disease resistance protein signature 327 341 - -
Prci8g0921 829 PRINTS Disease resistance protein signature 227 241 - -
Prci8g0921 829 PRINTS Disease resistance protein signature 804 820 - -
Prci8g0921 829 Pfam NB-ARC domain 133 380 IPR002182 GO:0043531
Prci8g0921 829 Gene3D - 292 383 IPR042197 -
Prci8g0921 829 CDD RX-CC_like 10 82 IPR038005 -
Prci8g0921 829 FunFam Probable disease resistance protein At1g63360 379 470 - -
Prci8g0921 829 Gene3D - 384 472 IPR036388 -
Prci8g0921 829 Gene3D - 112 286 IPR027417 -
Prci8g0921 829 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 393 IPR027417 -
Prci8g0921 829 SUPERFAMILY L domain-like 460 823 - -
Prci8g0921 829 Pfam Rx N-terminal domain 11 55 IPR041118 -
Prci8g0921 829 PANTHER DISEASE RESISTANCE PROTEIN RP 17 817 IPR044974 GO:0006952
Prci8g0921 829 Gene3D - 7 74 - -
Prci8g0921 829 Gene3D Ribonuclease Inhibitor 503 829 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0921 Prci-Chr8 6043493 6046212 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0921 123 340 WRKY Transcription Factor Family AT4G12020 27.556 2.25e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0921 K13457 - qsu:112004707 628.632