Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0919 ATGAGCGATTCTGCTTACAGAGTCGAAACCACGTCGCGCCTCGCCCAATGGAGAATCGAAAACCCTGCTTCCTGCACTTACCGCAAATCTGATCCTTTCAAGATCGGCAAGTGGAACTGGCATTTGGCCGTGGAGAAGAACCGGGTTTTATTTATAAAATTATACCCAGAAATTTCGAATATAACCAGAGACAATCCCCCGATTGCATCTTTTATCATTCGGGTCGTTAGTTCTGCCGGGGATCGCAAGGCCTTGACCCATCCAGTCGTGAAAGACAGACTGATCAAGAACAGCGAAGACTTTGTTTGGGCACTCGAGGTTCCAGTAACAGGGAAATTCATTGTTGACGTCGAGTTCCTTGATTTAAAGACTGCATCTCCAAACGGTGGAGAACCTTCCTCCATCTGGGCTGAAGGACTTACACCGAAGGCATCAAATGCAACGGCTCTTGAAGCTCTTGGTCGAATGCTAGCTGAAGGAATCCACACAGACATACTGATCAATGCATCTGATGGAAGCATTGGAGCTCATCGTGCAGTTCTTGCTGCCCGATCCCCTGTTTTTCGCAGCATGTTCTCGCATAACCTCAAGGAGAAGGAGCTATCAACTATAAACATTGAAGACATGTCCATTGATGCTTGCCAGGCATTCCTCAATTATCTTTATGGTAGCATAAAAACTGAAGAATTTCTCACACACAGGCTTGTCCTTCTTCATGCAGCTGACAAATATGACATATCTGACCTGAAAGAGGCATGCCATGAAAGCCTTTTAGAAGATATTGATACCAAAAATGTTCTTGAGAGGCTTCAAAATGCATCCTTGTACCAATTACCAAAACTGAAGAGTAGTTGTTTACGATATCTAGTAAAATTTGGGAAGATGTACGACATTCGTGATGATTTCAACTCCTTCCTACAGTGTGCAGATAGGGATCTGATTGCTGAAGTCTTCCATGAAATTCTCAATGCCTGGAGAGGGTTCTAA 987 0.4417 MSDSAYRVETTSRLAQWRIENPASCTYRKSDPFKIGKWNWHLAVEKNRVLFIKLYPEISNITRDNPPIASFIIRVVSSAGDRKALTHPVVKDRLIKNSEDFVWALEVPVTGKFIVDVEFLDLKTASPNGGEPSSIWAEGLTPKASNATALEALGRMLAEGIHTDILINASDGSIGAHRAVLAARSPVFRSMFSHNLKEKELSTINIEDMSIDACQAFLNYLYGSIKTEEFLTHRLVLLHAADKYDISDLKEACHESLLEDIDTKNVLERLQNASLYQLPKLKSSCLRYLVKFGKMYDIRDDFNSFLQCADRDLIAEVFHEILNAWRGF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0919 328 PANTHER OS08G0495500 PROTEIN-RELATED 5 327 IPR044714 -
Prci8g0919 328 SUPERFAMILY POZ domain 148 259 IPR011333 -
Prci8g0919 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Prci8g0919 328 Pfam BTB/POZ domain 156 259 IPR000210 GO:0005515
Prci8g0919 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
Prci8g0919 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Prci8g0919 328 Gene3D Potassium Channel Kv1.1; Chain A 140 291 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0919 Prci-Chr8 6012150 6014240 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Prci8g0919 BTB 5.2e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0919 K10523 - gmx:100790186 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0919 8 6012150 6014240 Prci2g3035 2 37983703 37988972 CCT
Prci8g0919 8 6012150 6014240 Prci8g0919 8 6012150 6014240 ECH