Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0909 ATGGACTCTCTAAATGAAAGGCCAGTTCAAGAGATCGAAAACGAGAGTCCTCATATCCCTGAAAGATCTGCTCAGAATTCAGAATCTACCAAGGAGGCTGAACAAGGATCATGTTCTGGAGCATTGTATGCCACGCATCAGAGAACACTCAGGAGTATGGTTTTCAACAGTATACAAATTGTGATGTTCTCAAATAGACTCAATTTGCTTATGTCTCTTGGGCCTTTGGCAATTATTGTGGAGAAATTGACTAATCATCACGGTTGGGTCTTCACTCTGAGTTTGTTGGGTATAATGCCTTTGGCTGAGCGGCTAGGTTATGCTACAGAGCAGCTGGCATTTTACTCTGGAGATGCTGTTGGGGGTCTTCTGAATGCGACTTTTGGAAATGCGACAGAACTGATCATTTCAATATATGCATTGAAAAGAGGAATGACAAGAGTTGTCCAGCTCTCTTTGCTGGGGTCAATTTTGTCTAACATGTTGTTGGTGCTTGGATGTGCATTTTTTTGTGGTGGGGTTGTTTTTAATAAGAAGGAGCAGGTTTTTAACAAGGCAACAGCTTCAGTGAACACAGGATTGTTGTTGATGGCAGTCATGGGCCTACTTTTTCCTGCTGTTCTTCACTACACACGCACTGAGGTCCATTTTGGGGAGTCAGAGTTGGCCCTTTCAAGATTCAGCAGCTGCATCATGCTTGTAGCTTATACTGCATACCTATTTTTCCAGTTAAATAGTCAAAGAAGTCTCTATCTCTCTTTGAATGAGGAGGAGGGGAATCATGGAAACTGCATAGAAGACGATGAATCTCCTGATATCTCTAAATGGGAATCAGTAACCTGGCTTTCAATTATGACTGCTTTGATATCAGTTCTATCAGAATATTTAGTTGGTGCTATAGAGGGAGCATCAACTTCATGGAAAATGCCAGTGTCTTTTATCAGTGTAATATTGCTTCCCCTAGTGGGAAATGCTGCAGAGCATGCCAGTGCTATCATGTTTGCAATGAAAGATAAGCTTGATCTTTCCTTGGGAGTAGCAATAGGTTCATCCACGCAGATATCTATGTTTGTGATACCACTTTGCGTGATTATTGGGTGGATAATGGGGCATCCTTTGGACTTAAACTTTCAACTTTTTGAGACAGCAACACTGTTTCTAACTGTTATTGTTGTAGTCCTCTTGTTGCAGGAAGGGACTTCTAATTACTTCAAGGGACTTATGCTTATTCTATGCTATCTGATAGTGGCAGCCAGTTTTTTTGTACATGTAGACCCTTCTTACTAG 1287 0.4134 MDSLNERPVQEIENESPHIPERSAQNSESTKEAEQGSCSGALYATHQRTLRSMVFNSIQIVMFSNRLNLLMSLGPLAIIVEKLTNHHGWVFTLSLLGIMPLAERLGYATEQLAFYSGDAVGGLLNATFGNATELIISIYALKRGMTRVVQLSLLGSILSNMLLVLGCAFFCGGVVFNKKEQVFNKATASVNTGLLLMAVMGLLFPAVLHYTRTEVHFGESELALSRFSSCIMLVAYTAYLFFQLNSQRSLYLSLNEEEGNHGNCIEDDESPDISKWESVTWLSIMTALISVLSEYLVGAIEGASTSWKMPVSFISVILLPLVGNAAEHASAIMFAMKDKLDLSLGVAIGSSTQISMFVIPLCVIIGWIMGHPLDLNFQLFETATLFLTVIVVVLLLQEGTSNYFKGLMLILCYLIVAASFFVHVDPSY 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0909 428 MobiDBLite consensus disorder prediction 1 37 - -
Prci8g0909 428 FunFam Vacuolar cation/proton exchanger 266 422 - -
Prci8g0909 428 FunFam Vacuolar cation/proton exchanger 118 257 - -
Prci8g0909 428 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 22 425 IPR004713 GO:0006812|GO:0008324|GO:0016020
Prci8g0909 428 NCBIfam calcium/proton exchanger 71 421 IPR004798 GO:0006816|GO:0015369
Prci8g0909 428 Gene3D - 264 422 IPR044880 -
Prci8g0909 428 Gene3D - 116 257 IPR044880 -
Prci8g0909 428 MobiDBLite consensus disorder prediction 1 18 - -
Prci8g0909 428 NCBIfam calcium/proton exchanger 54 421 - -
Prci8g0909 428 Pfam Sodium/calcium exchanger protein 89 244 IPR004837 GO:0016020|GO:0055085
Prci8g0909 428 Pfam Sodium/calcium exchanger protein 281 418 IPR004837 GO:0016020|GO:0055085
Prci8g0909 428 MobiDBLite consensus disorder prediction 19 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0909 Prci-Chr8 5933543 5938536 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0909 9 426 Antiporters AT1G55730 70.335 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0909 K07300 - qsa:O6P43_021359 642.499