Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0907 ATGGACTCTCTAAATGAAAGGCCAGTTCAAGAGATCGAAAACGAGAGTCCTCATATCCCTGAAAGATCTGCTCAGAATTCAGAATCTACCAAGGAGGCTGAACAAGGATCATGTTCTGGAGCATTGTATGCCACGCATCAGAGAACACTCAGGAGTATGGTTTTCAACAGTATACAAATTGTGATGTTCTCAAATAGACTCAATTTGCTTATGTCTCTTGGGCCTTTGGCAATTATTGTGGAGAAATTGACTAATCATCACGGTTGGGTCTTCACTCTGAGTTTGTTGGGTATAATGCCTTTGGCTGAGCGGCTAGGTTATGCTACAGAGCAGCTGGCATTTTACTCTGGAGATGCTGTTGGGGGTCTTCTGAATGCGACTTTTGGAAATGCGACAGAACTGATCATTTCAATATATGCATTGAAAAGAGGAATGACAAGAGTTGTCCAGCTCTCTTTGCTGGGGTCAATTTTGTCTAACATGTTGTTGGTGCTTGGATGTGCATTTTTTTGTGGTGGGGTTGTTTTTAATAAGAAGGAGCAGGTTTTTAACAAGCTGATTCATATTAGCATCCAGGCAACAGCTTCAGTGAACACAGGATTGTTGTTGATGGCAGTCATGGGCCTACTTTTTCCTGCTGTTCTTCACTACACACGCACTGAGGTCCATTTTGGGGAGTCAGAGTTGGCCCTTTCAAGATTCAGCAGCTGCATCATGCTTGTAGCTTATACTGCATACCTATTTTTCCAGTTAAATAGTCAAAGAAGTCTCTATCTCTCTTTGAATGAGGAGGAGGGGAATCATGGAAACTGCATAGAAGACGATGAATCTCCTGATATCTCTAAATGGGAATCAGTAACCTGGCTTTCAATTATGACTGCTTTGATATCAGTTCTATCAGAATATTTAGTTGGTGCTATAGAGGGAGCATCAACTTCATGGAAAATGCCAGTGTCTTTTATCAGTGTAATATTGCTTCCCCTAGTGGGAAATGCTGCAGAGCATGCCAGTGCTATCATGTTTGCAATGAAAGATAAGCTTGATCTTTCCTTGGGAGTAGCAATAGGTTCATCCACGCAGATATCTATGTTTGTGATACCACTTTGCGTGATTATTGGGTGGATAATGGGGCATCCTTTGGACTTAAACTTTCAACTTTTTGAGACAGCAACACTGTTTCTAACTGTTATTGTTGTAGTCCTCTTGTTGCAGGAAGGGACTTCTAATTACTTCAAGGGACTTATGCTTATTCTATGCTATCTGATAGTGGCAGCCAGTTTTTTTGTACATGTAGACCCTTCTTACTAG 1308 0.4128 MDSLNERPVQEIENESPHIPERSAQNSESTKEAEQGSCSGALYATHQRTLRSMVFNSIQIVMFSNRLNLLMSLGPLAIIVEKLTNHHGWVFTLSLLGIMPLAERLGYATEQLAFYSGDAVGGLLNATFGNATELIISIYALKRGMTRVVQLSLLGSILSNMLLVLGCAFFCGGVVFNKKEQVFNKLIHISIQATASVNTGLLLMAVMGLLFPAVLHYTRTEVHFGESELALSRFSSCIMLVAYTAYLFFQLNSQRSLYLSLNEEEGNHGNCIEDDESPDISKWESVTWLSIMTALISVLSEYLVGAIEGASTSWKMPVSFISVILLPLVGNAAEHASAIMFAMKDKLDLSLGVAIGSSTQISMFVIPLCVIIGWIMGHPLDLNFQLFETATLFLTVIVVVLLLQEGTSNYFKGLMLILCYLIVAASFFVHVDPSY 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0907 435 MobiDBLite consensus disorder prediction 1 37 - -
Prci8g0907 435 Gene3D - 116 264 IPR044880 -
Prci8g0907 435 Gene3D - 271 429 IPR044880 -
Prci8g0907 435 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 22 432 IPR004713 GO:0006812|GO:0008324|GO:0016020
Prci8g0907 435 FunFam Vacuolar cation/proton exchanger 118 264 - -
Prci8g0907 435 Pfam Sodium/calcium exchanger protein 288 425 IPR004837 GO:0016020|GO:0055085
Prci8g0907 435 Pfam Sodium/calcium exchanger protein 89 251 IPR004837 GO:0016020|GO:0055085
Prci8g0907 435 FunFam Vacuolar cation/proton exchanger 273 429 - -
Prci8g0907 435 MobiDBLite consensus disorder prediction 1 18 - -
Prci8g0907 435 NCBIfam calcium/proton exchanger 55 428 - -
Prci8g0907 435 MobiDBLite consensus disorder prediction 19 37 - -
Prci8g0907 435 NCBIfam calcium/proton exchanger 71 428 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0907 Prci-Chr8 5933543 5938542 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0907 9 433 Antiporters AT1G55730 69.176 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0907 K07300 - qsa:O6P43_021359 635.565