Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0879 ATGGAGTTAACTCCAAGAGGAAGAACCCAGCACTCTCCTTTGACTTTGAGCTTTGACAGAGATGCAGACTCTGTTTTGGAGCAAGATAGGGAGATTCTGTCGAAGTGGGCTGCCATAGAAAAGCTTCCCACTTTCAAAAGGATTAGAACTTCGTTTATTGATGTGATTGAAGATGATGATGGTCAAAGCAGCAGCAGCAGCAACATCAATTTAAAATCGGAGAGTAGAAGACAATTGAGGTCAGATAGTAAAAGGGTCGTTGATGTTACTAAACTTGGAGCACTTGATAGGCGTTTGTTGATTGACAAACTCATAAAGCACATTGAGAATGATAATCTCCAGTTGCTGCAGAAACTAAGGGAAAGGATAGAGAGAGTGAATGTGAAGATTCCTACTGTGGAGGTCAGGTATAAGAACCTTCATGTAGAAGCAGAATGTGAGGTTGTAAAGGGGAAGCCACTCCCTACACTGTGGAACACTATTGTTAGCTTCTTTTCAGGTTTTAGGAAGGCAGTACCTTGTACTTCTCAAGGAACCAACATAAGCATTCTTAAGGATGTAAGTGGCATCATAAAGCCATCAAGGCTTACCCTTCTCCTTGGCCCACCAGGCAGCGGGAAAACGACCTTGCTATTGGCACTGGCTGGAAAACTTGAGCAATCTCTCAAGGTGACTGGAGAAATATCTTACAATGGTCACATGCTAGATGAATTTGTTCCTCAAAAAACATCATCATATATAAGCCAGTATGACCTGCACATCCCTGAGATGACAGTGAGGGAAACAATTGACTTTTCAGCCCAATGCCAGGGGGTTGGCGACAGAGCTGATATAGTGGCTGAAGTGACAACAAAAGAGAAAGATGCAGGAATCATCCCTGACCCAGATATTGATGCCTATATGAAGGCAATATCAGTTGAAGGACAAAAAGAAAATCTACAAACTGATTATGTTTTGAAGATTCTTGGTCTTGATATCTGCGCAGACACAACAGTTGGTGATGCATTAGATAGGGGCATTTCAGGTGGACAGAAGAAAAGGCTTACAACAGGAGAGATGATTGTTGGTCCCATAAAAACTCTGTTTATGGATGAAATATCAACTGGCTTGGACAGCTCCACAACTTTTCAAATAATTACCTGTCTCCAGCAGTTGGTGCACATCACAGATGGAACTGCAGTGGTTTCACTTCTTCAGCCAGCTCCTGAAACCTTTGAATTATTTGATGATCTTATACTGATAGCTGAGGGGAAGATTGTATATCATGGTCCATGCAGTCAAGCGCTCCAATTTTTTGAGGAATGTGGTTTCAAGTGTCCTGAAAGGAAAGGAGTAGCGGACTTTCTCCAGGAAGTAACCTCTAAGAAGGATCAAGGGCAATACTGGTATCGTACAGACACTCCTTACAACTATGTTTCAGTAGGTCAATTCTCTCAAATTTTCAAAGCAAGTTATTGGGGACAAAGTTTGAATGATGAGCTCTCAAAGCCATATGATAAATCTCAATCCCATAAAAATGCTTTATCATTTAGCAAGTACTCCTTGGGCAAATGGGAATTGTTCCAAGCTTGTATGAGGAGGGAGATACTTCTCATGAAACGAAACTCTTTTATCTATGTATTCAAGACTGCACAGCTCACAATCACAGCAATCATAACGATGACAGTGTTTATACGCACTCAGTTGAATGTAGATATAAAGAGTGCAAACTTTTTACTGGGCTCGTTGTACTATACACTTGTCCGCCTCATGACTAATGGAGTTGCTGAGCTGATCTTGACTATTACTAGACTTCCTGTTGTTTACAAGCAGAAGGAATTCTATCTATATCCAGCATGGGCTTACTGTCTTCCAGCTTCGATTCTAAAGATTCCATTTTCAGTTATTGATTCAATTGTCTGGACTTCAGTAACTTATTATGTTATAGGCTACAGCCCTGAAGTAGAAAGGTTCTTCCGCCAGTTTCTTCTGCTTTTCACTCTGCATTTATCATCAACATCCTTATGCCGTTTCCTTGCCTCAGTTTTCCAAACTGATGTTGCAGCTACAACAGTCGGTTCCTTGTTCCTAGTACTGATGTTTTTGTTTGGAGGCTTCATTCTTCCCAGACCTTCATTACCATCGTGGTTGAGGTGGGGTTTTTGGCTCTCTCCCATGACATATGGAGAAATTGGATTAACAATAAATGAATTTCTCGCTCCCCGCTGGCAGAAGATTAAAGAGGGAGGCGTCCCCATAGGGGAGAAGGTTTTAACTAGTCATGGTTTAGACTTCAATGCAAACTTCTACTGGCTATCAATTGGGGCATTGCTCGGTTTCACAGTACTTTTTGATTTTGGATTTATCTTAGCATTAAGTTACTTAAAATCTCCAAGGATGTCTCGAGCTCTTGTTTCCAAAGCAAAGGCCTCTCAACTGCTAGGAGGAGAAGATGGCAAGAGCATGGAACTAGAAAATAGATCAGTTACAGTGGACATCAGCAAGACCTCAAAGGAAACACAAAACACAGGAAAAATGGTCCTGCCATTTCAGCCGCTGACAATAGTATTCAAGGATGTCCAGTATTTTGTCGACACCCCTCCAGAAATGAAAAGGCATGGGTCCAATGAGAAAAAACTTCAGTTACTCCGTGATATCACTGGAGCATTTAGGCCAGGAGTTCTCACAGCACTTATGGGAGTTAGTGGAGCAGGGAAAACGACTCTTATGGATGTCCTTTCAGGGAGAAAAACTGGAGGTATCATTGAAGGAGATATAAGAATTGGAGGATACCCCAAAGTGCAGAAGACGTTTGCAAGAGTTTCAGGTTACTGTGAGCAGATTGACGTACACTCCCCTTACATAACAGTTGAAGAATCTGTGAAATACTCAGCATGGTTGCGATTACCAATGGAGATTGATTCAGTCACAAAAGGGAAATTTGTAGGAGAAGTCATTGAAACAATTGAACTGGATGATATAAAGGATTGTTTAGTTGGCATAGCTGGCCAAAGTGGCTTATCAACTGAACAGCGTAAAAGACTTACCATTGCAGTGGAGCTTGTTTCCAATCCATCAATAATCTTTATGGATGAACCAACATCAGGTTTGGATGCCCGAGCAGCTGCCATAGTTATGCGTGCAGTGAAGAATGTGGTTGCCACAGGCAGGACCACAGTTTGCACCATACACCAACCAAGCATTGACATATTTGAGACTTTTGATGAGTTGATTCTAATGAAATCAGGAGGACAGATTATCTATAGTGGAAAACTTGGTCACCAGTCAAGCAGACTGATTGAATACTTTCAGGCTATACCAGGAGTGCCAAAGATCAAAGACAATTATAATCCTGCAACCTGGATGCTAGAAGCTACCTCTGCATCTGTAGAAGCAGAACTTAAAGTAGACTTTGCAAAAGTCTATAAGGAGTCACCTCTTTACTGGAACACCCTTGAATTGGTACAAGAGTTAAGTGAACCATCCCCGGGTTCAAAGGACTTGCAATTCTCGACTCGTTTTCCACAAAACAACCTGGGGCAGTTTACAGCATGTCTATGGAAGCAACACTTGTCCTATTGGAGAAGTCCTGAATACAACTTGACACGTTTTATGTTCATGGTTGTAGCAGCAGTAATATTTGGGGCAGTATTTTGGCAGAAAGGGAAGGAAATAAACAATGAGCAGGATTTGTTCAACGTACTGGGATCAATGTATATTGCTGTCATATTCTTGGGCATAAATAATTGTGCATCCATTTTACCATATGTGGTAACTGAGCGCACTGTCTTGTACCGTGAAAAATTTGCTGGAATGTATTCTTCCATGGCCTACTCATTTGCACAGGTGACCATTGAGATACCATATATCTTAGCGCAAGCTATTGTGTATGTGGCTATCACGTATCCAATGATAGGTTACTATTGGTCGGTTGAGAAGGTCTTTTGGTACTTCTACACCACATTCTGTACATTTTTGTACTTCGTATATCTTGGAATGTTGATAGTTTCGTTGAGCTTGAATCTCGATTTAGCTTCCATACTAGCAGCTGCAGTCTACACCATATTCAATCTTTTCTCTGGATTCCTCATGCCAGGACCGCAAATTCCTAAATGGTGGGTTTGGTGTTATTGGCTTTGCCCCACATCTTGGTCTCTAAATGGCCTCCTGACTTCACAATATGGGGACATAGACAAGACGATACTCATATTTGGGAAGCCAAAACCAGTTGGGGCCTTTCTGAGAGACTATTATGGGTTCCATCATGATCGGTTGAACATTGTGGCTGTGGTTCTTATCGCTTTCCCAATTGTTTATGCATCTCTGTTTGCCTATTGCATAGGGAAATTAAATTTCCAGAGAAGGTAG 4347 0.4152 MELTPRGRTQHSPLTLSFDRDADSVLEQDREILSKWAAIEKLPTFKRIRTSFIDVIEDDDGQSSSSSNINLKSESRRQLRSDSKRVVDVTKLGALDRRLLIDKLIKHIENDNLQLLQKLRERIERVNVKIPTVEVRYKNLHVEAECEVVKGKPLPTLWNTIVSFFSGFRKAVPCTSQGTNISILKDVSGIIKPSRLTLLLGPPGSGKTTLLLALAGKLEQSLKVTGEISYNGHMLDEFVPQKTSSYISQYDLHIPEMTVRETIDFSAQCQGVGDRADIVAEVTTKEKDAGIIPDPDIDAYMKAISVEGQKENLQTDYVLKILGLDICADTTVGDALDRGISGGQKKRLTTGEMIVGPIKTLFMDEISTGLDSSTTFQIITCLQQLVHITDGTAVVSLLQPAPETFELFDDLILIAEGKIVYHGPCSQALQFFEECGFKCPERKGVADFLQEVTSKKDQGQYWYRTDTPYNYVSVGQFSQIFKASYWGQSLNDELSKPYDKSQSHKNALSFSKYSLGKWELFQACMRREILLMKRNSFIYVFKTAQLTITAIITMTVFIRTQLNVDIKSANFLLGSLYYTLVRLMTNGVAELILTITRLPVVYKQKEFYLYPAWAYCLPASILKIPFSVIDSIVWTSVTYYVIGYSPEVERFFRQFLLLFTLHLSSTSLCRFLASVFQTDVAATTVGSLFLVLMFLFGGFILPRPSLPSWLRWGFWLSPMTYGEIGLTINEFLAPRWQKIKEGGVPIGEKVLTSHGLDFNANFYWLSIGALLGFTVLFDFGFILALSYLKSPRMSRALVSKAKASQLLGGEDGKSMELENRSVTVDISKTSKETQNTGKMVLPFQPLTIVFKDVQYFVDTPPEMKRHGSNEKKLQLLRDITGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGIIEGDIRIGGYPKVQKTFARVSGYCEQIDVHSPYITVEESVKYSAWLRLPMEIDSVTKGKFVGEVIETIELDDIKDCLVGIAGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAIVMRAVKNVVATGRTTVCTIHQPSIDIFETFDELILMKSGGQIIYSGKLGHQSSRLIEYFQAIPGVPKIKDNYNPATWMLEATSASVEAELKVDFAKVYKESPLYWNTLELVQELSEPSPGSKDLQFSTRFPQNNLGQFTACLWKQHLSYWRSPEYNLTRFMFMVVAAVIFGAVFWQKGKEINNEQDLFNVLGSMYIAVIFLGINNCASILPYVVTERTVLYREKFAGMYSSMAYSFAQVTIEIPYILAQAIVYVAITYPMIGYYWSVEKVFWYFYTTFCTFLYFVYLGMLIVSLSLNLDLASILAAAVYTIFNLFSGFLMPGPQIPKWWVWCYWLCPTSWSLNGLLTSQYGDIDKTILIFGKPKPVGAFLRDYYGFHHDRLNIVAVVLIAFPIVYASLFAYCIGKLNFQRR 1448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0879 1448 Pfam ABC transporter 184 366 IPR003439 GO:0005524
Prci8g0879 1448 Pfam ABC-2 type transporter 1057 1142 IPR043926 GO:0140359
Prci8g0879 1448 Pfam ABC-2 type transporter 399 450 IPR043926 GO:0140359
Prci8g0879 1448 FunFam ABC transporter G family member 34 172 475 - -
Prci8g0879 1448 FunFam ABC transporter G family member 34 862 1094 - -
Prci8g0879 1448 Pfam ABC-transporter N-terminal 100 159 IPR029481 -
Prci8g0879 1448 Coils Coil 116 136 - -
Prci8g0879 1448 CDD ABCG_PDR_domain2 845 1083 IPR034003 -
Prci8g0879 1448 Pfam ABC-2 type transporter 1174 1386 IPR013525 GO:0016020|GO:0140359
Prci8g0879 1448 Pfam ABC-2 type transporter 520 731 IPR013525 GO:0016020|GO:0140359
Prci8g0879 1448 Gene3D - 169 470 IPR027417 -
Prci8g0879 1448 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 162 441 IPR003439 GO:0005524
Prci8g0879 1448 Pfam ABC transporter 876 1028 IPR003439 GO:0005524
Prci8g0879 1448 SMART AAA_5 193 426 IPR003593 GO:0016887
Prci8g0879 1448 SMART AAA_5 885 1077 IPR003593 GO:0016887
Prci8g0879 1448 CDD ABCG_PDR_domain1 154 423 IPR034001 -
Prci8g0879 1448 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 848 1101 IPR003439 GO:0005524
Prci8g0879 1448 Pfam Plant PDR ABC transporter associated 736 798 IPR013581 -
Prci8g0879 1448 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 872 1085 IPR027417 -
Prci8g0879 1448 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 430 IPR027417 -
Prci8g0879 1448 Gene3D - 863 1095 IPR027417 -
Prci8g0879 1448 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 24 1448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0879 Prci-Chr8 5758022 5767102 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0879 873 1060 Calmodulin-binding Proteins AT2G36910 28.571 3.71e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0879 K08711 - gmx:100779615 2365.11