Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0866 ATGAAGAACACTCCAGAACGCCATTTTGTCCTTTCAAGTCAAAGTAATCAGAATGGAGGCAGTGATACAAACAAGCATAATCAAAAGTCTCGTCCTTCCCTTAAGTCTTTCAAATCTCTTGCCAAGAAATTCGCACTTGTTTTTGCGATCTTTCGCTCTGGCAAGGGAAAACCATCTGCAGAAGTTGCCGGAAGCAGTGATGTTAAAAGGAATAGAAGTAAATCCAGATGGGTATCATCATTTTCAACTGATGTATCGTCTGAGAGTAACAAGAATTCATGGAAGTTTTCTCACTCCTACGCATCTTCTAGCGTCACAAGTGGACAACTTGGAATGGGCAACTTCTCGTTCGAAGAGCTTTACAATGCAACAAGAAAATTTTCTGCAGATAATATAATAGGGGAAGGTGGGTTTGGAACTGTGTATAAGGGGAAGCTCAGTGATGGGTCTATTGTTGCTATAAAGCGCTCCAAGAAGACTACGCATGACAAGAACTTAGCGGAGTTCAAGAATGAAATAAATACTCTGTCAAAAATTGAGCATCTGAATCTTGTGAGGTTATATGGATATTTGGAGCATGAAAATGAAAAGATGGTTGTTGTTGAATATGTTGGCAATGGGACACTTAGAGAACATCTGAATGGTACAAGAGGAAATGGACTGGAAATTGGTGACCGTCTAGACATTGCAATTGATGTTGCTCATGCAATAACTTACCTTCATATGTACACAGATCATCCAATAATCCATAGAGACATCAAATCATCCAACATCTTACTCACAGAAAAATTGAGGGCTAAAGTTGCAGACTTTGGATTTGCTCGTTTGGCTTCAGATGATCCTGCAGCAACTCATATCTCAACTCAAATAAAAGGAACAGCTGGTTACTTGGACCCTGAGTACCTTCGAACATATCAACTCACTAAGAAGAGTGATGTTTATTCGTTTGGCGTATTGCTCGTTGAAATGATGACCGGGAGACATCCCTTAGAACCAAAGAGACCTCTCAGTGAGAGAGTGACCATCAGATGGGCAATGCAGATGTTGAAACAAGGAGATGCTGTTATTGCCATGGACCCCAGGCTGTGGAGAAGTCCAGCTTCAACCACGGCAATGGAGAAGGTTATGAAGCTTGCCTTCCAATGTCTTGCACCGTTGAGGCAGTCGCGACCTTCCATGAAAACTTGTGCGGAGATTCTATGGGGAATCCGAAAAGAGTTGAGAGATCAAGCTTTGGCTAATGTTCCTCCTCTTGCTTCTCATCATTCTGCAGATTTCACTAAAGCTGACGATAGGAAGAATAAGTTTGTATCGCTTGAAGTTGAGGATGATGACAATTATAAGTTTGTCTCTGCCTAA 1359 0.4143 MKNTPERHFVLSSQSNQNGGSDTNKHNQKSRPSLKSFKSLAKKFALVFAIFRSGKGKPSAEVAGSSDVKRNRSKSRWVSSFSTDVSSESNKNSWKFSHSYASSSVTSGQLGMGNFSFEELYNATRKFSADNIIGEGGFGTVYKGKLSDGSIVAIKRSKKTTHDKNLAEFKNEINTLSKIEHLNLVRLYGYLEHENEKMVVVEYVGNGTLREHLNGTRGNGLEIGDRLDIAIDVAHAITYLHMYTDHPIIHRDIKSSNILLTEKLRAKVADFGFARLASDDPAATHISTQIKGTAGYLDPEYLRTYQLTKKSDVYSFGVLLVEMMTGRHPLEPKRPLSERVTIRWAMQMLKQGDAVIAMDPRLWRSPASTTAMEKVMKLAFQCLAPLRQSRPSMKTCAEILWGIRKELRDQALANVPPLASHHSADFTKADDRKNKFVSLEVEDDDNYKFVSA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0866 452 FunFam Leucine-rich repeat receptor protein kinase MSP1 89 203 - -
Prci8g0866 452 MobiDBLite consensus disorder prediction 1 33 - -
Prci8g0866 452 SMART serkin_6 127 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0866 452 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 204 414 - -
Prci8g0866 452 ProSitePatterns Protein kinases ATP-binding region signature. 133 155 IPR017441 GO:0005524
Prci8g0866 452 Pfam Protein tyrosine and serine/threonine kinase 130 400 IPR001245 GO:0004672|GO:0006468
Prci8g0866 452 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 70 422 IPR044652 GO:0004672
Prci8g0866 452 SUPERFAMILY Protein kinase-like (PK-like) 103 403 IPR011009 -
Prci8g0866 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Prci8g0866 452 Gene3D Phosphorylase Kinase; domain 1 86 203 - -
Prci8g0866 452 ProSiteProfiles Protein kinase domain profile. 127 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0866 452 MobiDBLite consensus disorder prediction 1 27 - -
Prci8g0866 452 Gene3D Transferase(Phosphotransferase) domain 1 204 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0866 Prci-Chr8 5676708 5679932 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0866 69 410 Receptor kinase-like Gene Family AT4G39110 40.525 1.42e-69 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Prci8g0866 PK_Tyr_Ser-Thr 1.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0866 - - gmx:100811511 593.578