Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0858 ATGAAGTGGGAAACGGGAATATTCTCACCTGGACAATACATCGCCAATTCCAACACCAGCTGGATTCTTGAAGATAATCGTAATCCCAAATGGACTCGTGCCGAGAACAAGCTCTTCGAAAATGCCCTCGCGGTTTACGACACGGATACCCCAGATCGGTGGCAGAAAGTGGCTGCAATGATCCCGGGGAAGACGGTCAGTGACGTGATGAAGCAGTACAAACAGCTTGAAGACGATGTTTGTAACATAGAAGCTGGCCTGGTCTCAGTTCCTGACTATTACGCCACCACTCCTTCCTCATCTTTCACCTTGGACTGTTGGGCCAACTCTTCTTCTGGGCACGATCCTTCCCAGGGATTCCATGGAAAGAGATCCTCCTCTGGAAGACCATCTGAGAATGAAAGGAAGAAAGGAATCCCTTGGACCGAAGAAGAACACAAACTTTTTCTTCTGGGACTGAAGAAACATGGGAAGGGAGATTGGAGGAACATATCAAGGAATTTCGTGCTGACTCGAACACCGACTCAAGTTGCTAGCCATGCTCAGAAATACTTCATAAGGCAACTCTCGGGAGGGAAAGACAAGAGAAGAGCAAGCATCCATGACATAACCACAGTGAACCTCACAGAAACCTCAATCACACCACGAGACGCCACCAAGAAGTCGTCCTCTTCTTCACCGCCACAAAATCCCATGAACATGATGCTTTCAAACTCACAGGCGCAGCAGCAGAATTCTGGAGTTTCCAGAACTCAGTTTCAGTGGACCCACCAACCAATGGCTGCTCTGAGTAATCCTGCATATGATGAAGTGTTTCTGTCCGATATTTACGGGATTGGTGACGACTTATCATCCTTTGGGTTTAGAATGCAGGACCAGAATCTGCACACAGGTGCTCTTCATCATCATGAATCTTCTTCCTACTTAGGGCCTCATCACAGTCAAAACATGGTTTTCCAGATGCCATGA 969 0.4747 MKWETGIFSPGQYIANSNTSWILEDNRNPKWTRAENKLFENALAVYDTDTPDRWQKVAAMIPGKTVSDVMKQYKQLEDDVCNIEAGLVSVPDYYATTPSSSFTLDCWANSSSGHDPSQGFHGKRSSSGRPSENERKKGIPWTEEEHKLFLLGLKKHGKGDWRNISRNFVLTRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLTETSITPRDATKKSSSSSPPQNPMNMMLSNSQAQQQNSGVSRTQFQWTHQPMAALSNPAYDEVFLSDIYGIGDDLSSFGFRMQDQNLHTGALHHHESSSYLGPHHSQNMVFQMP 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0858 322 MobiDBLite consensus disorder prediction 303 322 - -
Prci8g0858 322 MobiDBLite consensus disorder prediction 211 250 - -
Prci8g0858 322 FunFam transcription factor MYB1R1 139 190 - -
Prci8g0858 322 FunFam Transcription factor SRM1 23 90 - -
Prci8g0858 322 CDD SANT 30 76 IPR001005 -
Prci8g0858 322 Pfam Myb-like DNA-binding domain 140 185 IPR001005 -
Prci8g0858 322 SUPERFAMILY Homeodomain-like 29 84 IPR009057 -
Prci8g0858 322 ProSiteProfiles SANT domain profile. 26 79 IPR017884 -
Prci8g0858 322 SMART sant 27 79 IPR001005 -
Prci8g0858 322 SMART sant 137 187 IPR001005 -
Prci8g0858 322 Gene3D - 139 189 - -
Prci8g0858 322 MobiDBLite consensus disorder prediction 113 140 - -
Prci8g0858 322 Gene3D - 24 90 - -
Prci8g0858 322 ProSiteProfiles SANT domain profile. 141 189 IPR017884 -
Prci8g0858 322 NCBIfam myb-like DNA-binding domain, SHAQKYF class 136 188 IPR006447 GO:0003677
Prci8g0858 322 ProSiteProfiles Myb-like domain profile. 133 185 IPR001005 -
Prci8g0858 322 ProSiteProfiles Myb-like domain profile. 23 77 IPR001005 -
Prci8g0858 322 SUPERFAMILY Homeodomain-like 135 188 IPR009057 -
Prci8g0858 322 CDD SANT 140 185 IPR001005 -
Prci8g0858 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 133 189 IPR017930 -
Prci8g0858 322 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 25 252 IPR043363 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0858 Prci-Chr8 5552593 5554673 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci8g0858 Myb_DNA-binding 1.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0858 - - gmx:100784163 366.311