Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0848 ATGGCAACCTTTGCTGGTTTCTTGGCCAAGTTCCTCTCTCTTTTCATCCTCTTTCTACACCTTGGCTGCTTCATTTTCTCCACCGCCGCCGGCTCCGGCGGTGAAGGGAGACAGCAAGGTGCCCGAAAGTCGCCGTCAAAGAAGCGCAAGGTTTCCCCTGTTTCCCACTCGCAGCAACCTTCTCCTCCTCATCCTAAGTTCAAAACACGTAAGGCTCTTTCTTCTTCTTGGACCTTCATCAAGCACCTTTTCTCCCCAAAATCCTGCAAAACCAGTGACGTTGCTCAGGGATCGCCGCAATCCTCCGCCTCCACCGCTATTTCGTCCCAGCAGTCTTTAGTCTCTCTGGCGCAAGCCGAATCGCATGTGCTGGATCCTCCCGGCAAAAAATCATCGGGGTCATGTCCAGAATCCGATATCGCCGCCGACAACAACCACTTTTTCCCTCTCCGCAATGACATCTTCCCCTGCACCGCCTGCGGCGAGGTTTTCCAGAAACCACAAGTTCTCGAGCAGCATCAATCGCTCAAACACGTCGTGTCGGAGCTGGCGGAGACTGACGCTGGTCACAACATAGTACGGATAATTTTCAAGTCGGGTTGGACCAACACGCAGAAATGCCCCAGAATAAGTCGGATCCTAAAGATCCATAACAGCCCGAAGATCCTCTCCAAGTTCGAAGAATACAGAGAGACGGTGAAGGCCAAGGCCTCCCGAAACGGCGCAGTAAAGAAGGGCGACGAGCGATGCATAGCCGATGGCAACGAGCTCATGCGATTCCACTGTTCTACATTCCTCTGCGACTTGGGACTCAACGGGAATTCCGGCATTTGTGGCCAGCAATATTGTAATATCTGCGGGATCATCAAGTCGGGGTTCTCACCCAAACTGGACGGAATCTCCACGCTATCGACGAGCTGGAGGGCGCATGTGTCCATCCCGGAGGAGGTGGAGGAGGAGTTCAAGTTCATGAACGTGAAGCGGGCCATGCTGGTATGCCGGGTTATCGCAGGTCGGATCGGCACTGATTCGGACGAGGCCGACAAAGAGGACGGAGGTTTTGACTCTGTGATGGCGCGTGGCGGAACCGGAGTTTACACCCGGCTGGATGAAGAAGAGCTGCTGGTGTTCAATCCTAGAGCTGTGCTCCCATGCTTTGTGATTGTGTATAGCGTGTGA 1179 0.5394 MATFAGFLAKFLSLFILFLHLGCFIFSTAAGSGGEGRQQGARKSPSKKRKVSPVSHSQQPSPPHPKFKTRKALSSSWTFIKHLFSPKSCKTSDVAQGSPQSSASTAISSQQSLVSLAQAESHVLDPPGKKSSGSCPESDIAADNNHFFPLRNDIFPCTACGEVFQKPQVLEQHQSLKHVVSELAETDAGHNIVRIIFKSGWTNTQKCPRISRILKIHNSPKILSKFEEYRETVKAKASRNGAVKKGDERCIADGNELMRFHCSTFLCDLGLNGNSGICGQQYCNICGIIKSGFSPKLDGISTLSTSWRAHVSIPEEVEEEFKFMNVKRAMLVCRVIAGRIGTDSDEADKEDGGFDSVMARGGTGVYTRLDEEELLVFNPRAVLPCFVIVYSV 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0848 392 MobiDBLite consensus disorder prediction 118 137 - -
Prci8g0848 392 Gene3D - 179 391 - -
Prci8g0848 392 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 76 390 - -
Prci8g0848 392 ProSitePatterns Zinc finger C2H2 type domain signature. 157 178 IPR013087 -
Prci8g0848 392 ProSiteProfiles Zinc finger C2H2 type domain profile. 155 183 IPR013087 -
Prci8g0848 392 SUPERFAMILY ADP-ribosylation 181 391 - -
Prci8g0848 392 MobiDBLite consensus disorder prediction 31 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0848 Prci-Chr8 5486327 5488093 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0848 77 392 C2H2 Transcription Factor Family AT2G29660 54.294 3.14e-108 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci8g0848 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0848 - - qsa:O6P43_014008 547.354