Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0842 ATGGAAGGCCAGAGCAAGACTATCACTATGCCTCTGAACAACCCTACCATTATTTCCATGCACCGATCATCGCCTTCTTCTTCTTCTTTAGGGCCTCCTCTGAGTGCCATAGACAGGTTCTTGTGGGGCCAACTCAGTCACTTGCAGTCTGCTCTGTGGCCTAATAATATCTGTACCGATGAAGAAGAGATAGAAGCAAGCTTGATGGATGGGTTTATAGCAAATAACGAAGCAGCTCAAATGATCCCTACCGTGCTGAAGAAACAAGTGCAGGTGCTGGGGAAGAAAGCTTCATCTGGTAACAATACAATGGTGGCGGGAAAGAGAAGCAACAAGAAAGGGTCTTCTTCTGCGTCGTTGATCAAAGGACAATGGACTGATGAAGAAGATAGGAAACTGGTGAAGCTGGTAAGAGAACATGGAGTGAGGAAGTGGGCTCAGATAGCTGAGAATTTGGAGGGAAGAGCTGGGAAGCAATGCAGGGAGAGATGGCACAATCATCTACGTCCTGATATTAAGAAGGATAGTTGGAGTGAAGAAGAAGAGAGAATATTAGTAGAAACACATGCAAAGGTGGGAAATAGGTGGGCAGAGATAGCGAAGAGAATTCCTGGAAGAACAGAGAATGCTATCAAGAACCATTGGAATGCCACCAAAAGGAGACAGAACTCCAAGAGAAACCAGAAATCTGCACACAAAACCTCCAACAACAATGGAAGAAAGCCTCCTCCTTCCATTCTTCAAGACTACATCAGAAGCAAGACTCTCTCCAATATCCCCCCCATTGTTGATGATCATCATGTCGTCACACCTGAAAACCAGTTCCATCTTGTGATTTCTGATGATCAAGATCCCTCTAAAGAACCTGTCATGGTTGAACCATTGGATGATGAGCTTCTCTTCATGCAACAGTTCTTCTCGGAGAATTATCAGACTCAGAAGGTTCAGTCCACTTTGGATTTTTATCGAACAGATGGTGGGCGTGAGTGTTATCTTCCTGAACAGAGTCCTGCTGCTTTAAGTGGTGCTCCCATGAAACAACACCATCATCATTCTGATCTGTTTCTGGCTCAGTTGCTGAATGGGGTTGGTTATGATTCTTCGTTTTTCTGCTGTGATTATGGAGAAGAGCAAAACTTAAACACGGGTTTACAGGTAGGGGATGATCAGCAAGGTTGGTATGAACCCAGGAGAGAGATGGATCTGATGGAATTGGTTTCCTCTCAGCTTTCAGCTAGCACCAGCAATAGGAACTCCTAA 1260 0.4476 MEGQSKTITMPLNNPTIISMHRSSPSSSSLGPPLSAIDRFLWGQLSHLQSALWPNNICTDEEEIEASLMDGFIANNEAAQMIPTVLKKQVQVLGKKASSGNNTMVAGKRSNKKGSSSASLIKGQWTDEEDRKLVKLVREHGVRKWAQIAENLEGRAGKQCRERWHNHLRPDIKKDSWSEEEERILVETHAKVGNRWAEIAKRIPGRTENAIKNHWNATKRRQNSKRNQKSAHKTSNNNGRKPPPSILQDYIRSKTLSNIPPIVDDHHVVTPENQFHLVISDDQDPSKEPVMVEPLDDELLFMQQFFSENYQTQKVQSTLDFYRTDGGRECYLPEQSPAALSGAPMKQHHHHSDLFLAQLLNGVGYDSSFFCCDYGEEQNLNTGLQVGDDQQGWYEPRREMDLMELVSSQLSASTSNRNS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0842 419 MobiDBLite consensus disorder prediction 101 122 - -
Prci8g0842 419 ProSiteProfiles Myb-like domain profile. 169 219 IPR001005 -
Prci8g0842 419 ProSiteProfiles Myb-like domain profile. 117 168 IPR001005 -
Prci8g0842 419 Gene3D - 121 173 - -
Prci8g0842 419 PANTHER MYB PROTEIN-RELATED 108 242 - -
Prci8g0842 419 SUPERFAMILY Homeodomain-like 119 215 IPR009057 -
Prci8g0842 419 FunFam Transcriptional activator Myb isoform A 121 174 - -
Prci8g0842 419 SMART sant 121 170 IPR001005 -
Prci8g0842 419 SMART sant 173 221 IPR001005 -
Prci8g0842 419 MobiDBLite consensus disorder prediction 229 243 - -
Prci8g0842 419 Pfam Myb-like DNA-binding domain 125 182 - -
Prci8g0842 419 CDD SANT 176 219 IPR001005 -
Prci8g0842 419 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 117 172 IPR017930 -
Prci8g0842 419 MobiDBLite consensus disorder prediction 205 247 - -
Prci8g0842 419 Gene3D - 175 243 - -
Prci8g0842 419 CDD SANT 125 168 IPR001005 -
Prci8g0842 419 MobiDBLite consensus disorder prediction 1 30 - -
Prci8g0842 419 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 173 223 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0842 Prci-Chr8 5460520 5463888 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0842 31 413 MYB Transcription Factor Family AT5G58850 39.437 6.14e-81 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci8g0842 Myb_DNA-bind_6 1.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0842 K09422 - cit:112499370 305.834