Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0837 ATGGAGGCCTCATGGCAGCAAAGTGTTACATACTCCCTCAACACCATCTTCCTCCTCTTTTCTGCCTACCTCGTCTTCGTCATGCAAATCGGCTTCGCCATGCTCTGTGCCGGCTCTGTCAGAGCTAAGAACGCCGTCAACATTATGCTCACCAATGTCGTCGACGCCGTCGTTGGAAGCATCTCCTTCTACCTCTTCGGCTTCGCATTTGCCTTCGGCGACGGCGCCAGTTCTAACCCTTTCATCGGTACTAATCTGTTTGCTCTCGCTAGCATTCCTAATGGCACTTACGATTACAGTTTCTATCTTTACCAATGGGCTTTTGCAATAGCCGTAGCAGGCATCACAAGTGGGTCTATCGCTGAGAGAGCCCAGTTCAGTGCTTATCTCGTTTTCAGTTTTTTTCTCACGGGCTTTGTTTACCCAGTTGTGGTCCATTGGGTCTGGTCCTCCGACGGCTGGCTCAGTACTGGGTCGAGCCATTTGTTTCTGGGGTCAGGTGCCATTGATTTCGCTGGGAGCGGAGTGGTGCATCTGGTTGGTGCTGTAGCTGGTTTCTGGGGTTCGCTCATATTAGGCCCTCGGGTGGGCCGGTTTGACGCGTTCGGCAAGCCAGTGCCATTCCGAGGCCACAATGCAAGTCTCGTGGTACTTGGAACGTTCCTTTTGTGGTTTGGGTGGTTTGGGTTTAATCCCGGTTCATTTGATAAGATTCTTCTATCGTATCCTGACACATCCGACGAGGGTAATTGGACCTCCATCAGTCGAACTGCGGTTGTGACTACATTAGCCGGTTCAACAGCCGGAATCATAACCTTGTTTGGTCGGCGATTAATAATCGGCCACTGGGATGCAATAGATGTTTGCAACGGGTTGCTCGGGGGGTTTGTTGCTATCACTTCCGGATGCTCGGTTGTTGAGCCATGGGCCGCCATTATTTGTGGGTTTGTTTCAGCTTGGGTCCTGATTGGGCTCAATATCTTGGCCCTGAAATTGAACTATGATGACCCATTAGAGGCGGCCCAATTACATGGTGGGTGTGGGGCTTGGGGTTTGATATTCACGGGATTGTTTGCCAAGGAAGAGTTTGTGATTCAAGTCTATGACAAAGGCGTGACTGGGGTTACCAGACCCTATGGGCTTCTATTAGGAGGTGGATGGGCTTTAATTGGAGCCCAAATTATTGAATTGTTATCTATATTGGGTTGGGTTAGTGTTACCATGGGCCCTTTGTTCTATGCCTTGCACAAGCTTAGGCTGTTAAGAATCTCCAAAGACGATGAAGTTACAGGCCTTGATATCTCAACCCATGGAGGTTCTGCTTATTCTCATCAAGAGGAAAACTTCCCTCTATCTTACGCCGATTATATTCGCCTTAGAGATCGTAATCTTGATTGA 1398 0.4921 MEASWQQSVTYSLNTIFLLFSAYLVFVMQIGFAMLCAGSVRAKNAVNIMLTNVVDAVVGSISFYLFGFAFAFGDGASSNPFIGTNLFALASIPNGTYDYSFYLYQWAFAIAVAGITSGSIAERAQFSAYLVFSFFLTGFVYPVVVHWVWSSDGWLSTGSSHLFLGSGAIDFAGSGVVHLVGAVAGFWGSLILGPRVGRFDAFGKPVPFRGHNASLVVLGTFLLWFGWFGFNPGSFDKILLSYPDTSDEGNWTSISRTAVVTTLAGSTAGIITLFGRRLIIGHWDAIDVCNGLLGGFVAITSGCSVVEPWAAIICGFVSAWVLIGLNILALKLNYDDPLEAAQLHGGCGAWGLIFTGLFAKEEFVIQVYDKGVTGVTRPYGLLLGGGWALIGAQIIELLSILGWVSVTMGPLFYALHKLRLLRISKDDEVTGLDISTHGGSAYSHQEENFPLSYADYIRLRDRNLD 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0837 465 Pfam Ammonium Transporter Family 17 442 IPR024041 GO:0008519|GO:0016020|GO:0072488
Prci8g0837 465 ProSitePatterns Ammonium transporters signature. 170 195 IPR018047 GO:0008519|GO:0016020|GO:0072488
Prci8g0837 465 Gene3D Ammonium transporter AmtB like domains 2 455 IPR029020 -
Prci8g0837 465 NCBIfam ammonium transporter 14 442 IPR001905 GO:0008519|GO:0016020|GO:0072488
Prci8g0837 465 FunFam Ammonium transporter 1 454 - -
Prci8g0837 465 PANTHER AMMONIUM TRANSPORTER 10 444 - -
Prci8g0837 465 SUPERFAMILY Ammonium transporter 11 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0837 Prci-Chr8 5396129 5398353 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0837 7 448 Inorganic Solute Cotransporters AT1G64780 65.848 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0837 K03320 - pvy:116129597 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0837 8 5396129 5398353 Prci8g0837 8 5396129 5398353 ECH