Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0834 ATGGAAGAGGACATAGAGAAGAAAGGAGAGGGAAGTGGAAAGAAGAGTGTGACGATGCAGAGAGAGAACAGTGAAGGAGGGACGAGAGGTCAAGTGTTGAGGAAAGTGATGAGAAACTTGCAAGAGGTCATCTTCGGCACCAAGCTTGCCGTGCTTTTTCCCGCCGTTCCTCTCGCCGTCGCCGCTGATACCTATGACTTTGGACGGGCATGGATATTTGCTCTGAGCTTACTTGGACTTGCCCCTCTAGCTGAACGTGTCAGCTTCCTCACCGAACAAATCGCATATTTCACTGGCCCAACAGTTGGAGGGCTTCTCAATGCAACATGTGGGAATGCAACTGAGATGATAATAGCACTACTGGCACTTCACAAGAACAAAATCAATGTTGTCAAGTTCTCTCTTCTGGGTTCCATTCTCTCTAATCTCCTCTTAGTTCTTGGCTCTTCACTTCTCTGTGGAGGCCTTGCCAACCTCAAGAAAGAACAGAAGTATGACAGAAAACAAGCAGATGTAAACTCACTCCTTTTGCTTTTGGGATTGCTTTGTCATTTGCTGCCATTGATCTTCAAGTATGCCCTAGCAGGGGACCATTACCCTATCGCTACTTGTACTCTTCAATTGTCAAGAGCAAGTAGTATTGTCATGCTTCTGGCTTATGTTGCTTATATCTTTTTCCAATTGAAAACTCACAGACAGTTATTTGATTCACAAGAGGAAGATGATGAAGAAGAGAAGGCTGTGATAGGATTTTGGGTTGCGTTTACCTGGTTGGTGGGCATGACACTCCTCATATCTTTGCTTTCTGAATATGTTGTGGGAACTATTGAGGCTGCTTCAGATTCTTGGGGTATTTCTGTAAGCTTCATTAGCATAATTTTGCTCCCAATTGTGGGGAATGCTGCAGAACATGCTGGTTCAATCATATTTGCTTTTAAGAACAAGCTGGATATATCGCTAGGTGTTGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTGATTGTTGCATGGATAATGGGAGTAAAAATGGACCTAGATTTTAATCTCCTAGAAACTGCGTGTCTTGCTCTGACAATAATAGTCACAGCTTTCACTTTGCAGGATGGAACTTCACACTACATGAAAGGAGTGGTGCTTTCGCTGTGTTACATTGTCATTGCTGCATGCTTTTTTGTTTATAAAGTTCCATTTGCCAATCAAATTCCAGGCGAGAATGTTAGATTTCAACCATCTACGGATGCCATGGCCACTTGA 1272 0.4316 MEEDIEKKGEGSGKKSVTMQRENSEGGTRGQVLRKVMRNLQEVIFGTKLAVLFPAVPLAVAADTYDFGRAWIFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATEMIIALLALHKNKINVVKFSLLGSILSNLLLVLGSSLLCGGLANLKKEQKYDRKQADVNSLLLLLGLLCHLLPLIFKYALAGDHYPIATCTLQLSRASSIVMLLAYVAYIFFQLKTHRQLFDSQEEDDEEEKAVIGFWVAFTWLVGMTLLISLLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVAMGSATQISMFVVPLSVIVAWIMGVKMDLDFNLLETACLALTIIVTAFTLQDGTSHYMKGVVLSLCYIVIAACFFVYKVPFANQIPGENVRFQPSTDAMAT 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0834 423 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 22 401 IPR004713 GO:0006812|GO:0008324|GO:0016020
Prci8g0834 423 Gene3D - 250 398 IPR044880 -
Prci8g0834 423 Gene3D - 100 249 IPR044880 -
Prci8g0834 423 MobiDBLite consensus disorder prediction 1 15 - -
Prci8g0834 423 FunFam Vacuolar cation/proton exchanger 244 398 - -
Prci8g0834 423 FunFam Vacuolar cation/proton exchanger 100 243 - -
Prci8g0834 423 Pfam Sodium/calcium exchanger protein 70 228 IPR004837 GO:0016020|GO:0055085
Prci8g0834 423 Pfam Sodium/calcium exchanger protein 254 395 IPR004837 GO:0016020|GO:0055085
Prci8g0834 423 NCBIfam calcium/proton exchanger 54 397 IPR004798 GO:0006816|GO:0015369
Prci8g0834 423 MobiDBLite consensus disorder prediction 1 28 - -
Prci8g0834 423 NCBIfam calcium/proton exchanger 35 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0834 Prci-Chr8 5358927 5362626 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0834 33 402 Antiporters AT2G38170 69.048 2.31e-180 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0834 K07300 - gmx:100802344 611.683