Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0804 ATGTCTTGCTCCATCGCTGTCCCTACCTCTCCTTCCCTCTTCTGCAACAACATGAACTCCCTCATATCTCCTCCTTCTTCCCCTCCTTCTTCCTGCTTCAGGCTCCTCAAGCCTCCAATCGCTTTGCCCGCTCCTCCCTCTCCTTCTGTTTCCACTTCTGCTCCGTCGTCTTCCTCTTCCTCGCCCACGAACTCCCTCTTGAAGAGGAAGAGGCCTGCCAGGCTTGATATTCCCGTCGCGTCTCTCGCTTTTGGTGCCCCGGCAACGCCGTCTGCGGCGTCTCGTGATTTCATGGAGGCTGAAGGCAATGGGTTTTCTGTGTATTGCAAGAGGGGAAAGAGGGAGTTCATGGAGGACCGTTATTCGACTGCCGTTAATCTACAAGGAAAACAAAACCAGGCTTTCTTTGGGATATTCGATGGGCATGGGGGAGCAAAAGCTGCGGAATTTGCTGCTCATAACTTGGAAAATAATGTCTTGAAAGAAGTAATTAGGAGGAGTGAGAACGAAGATGACGACAACAGCGACGGCATTGAAGAGGCAGTGAAACATGGTTACTTGACCACAGATTTGGAGTTCCTAAAAGAGGATGTACAAGGTGGCTCTTGCTGTGTAACGGCATTGATCAGAAACGGCAACCTCATTGTGTCCAATGTTGGTGATTGTCGTGCTGTCCTTTCCAGGGGAGGCGAAGCCGAGGCCCTCACATCTGATCACCGGCCCTCAAGGGAAGACGAGAGGGGCAGAATTGAAGCTCTGGGTGGCTATGTAGATCTATGCCATGGAGTTTGGAGGATCCAGGGATCTCTTGCTGTGTCTAGAGGAATTGGAGATAAGCACCTGAAGCAATGGGTGACAGCGGAACCTGAAACTAAAATTCTCAAAATTGAAGATGAACATGACTTGTTAATACTAGCTTCAGATGGACTATGGGATAAGGTTACTAATCAGGAAGCAGTGGATATTGCTCGTTCTTTTTGTGTTGGAAGTGATAAGCCACAGCCATTGTTGGCCTGTAAAAAGCTTGTAGAGTTGTCAGCTTCACGAGGCTCTTTTGATGATATAAGCGTTATGGTGATCAAGCTGGGTCACTATACATGA 1101 0.4877 MSCSIAVPTSPSLFCNNMNSLISPPSSPPSSCFRLLKPPIALPAPPSPSVSTSAPSSSSSSPTNSLLKRKRPARLDIPVASLAFGAPATPSAASRDFMEAEGNGFSVYCKRGKREFMEDRYSTAVNLQGKQNQAFFGIFDGHGGAKAAEFAAHNLENNVLKEVIRRSENEDDDNSDGIEEAVKHGYLTTDLEFLKEDVQGGSCCVTALIRNGNLIVSNVGDCRAVLSRGGEAEALTSDHRPSREDERGRIEALGGYVDLCHGVWRIQGSLAVSRGIGDKHLKQWVTAEPETKILKIEDEHDLLILASDGLWDKVTNQEAVDIARSFCVGSDKPQPLLACKKLVELSASRGSFDDISVMVIKLGHYT 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0804 366 PANTHER PROTEIN PHOSPHATASE 2C 66 361 IPR015655 GO:0004722|GO:0006470
Prci8g0804 366 MobiDBLite consensus disorder prediction 51 67 - -
Prci8g0804 366 ProSitePatterns PPM-type phosphatase domain signature. 135 143 IPR000222 GO:0043169
Prci8g0804 366 FunFam probable protein phosphatase 2C 25 97 365 - -
Prci8g0804 366 SMART PP2C_SIG_2 116 362 IPR001932 -
Prci8g0804 366 MobiDBLite consensus disorder prediction 44 70 - -
Prci8g0804 366 ProSiteProfiles PPM-type phosphatase domain profile. 104 362 IPR001932 -
Prci8g0804 366 SUPERFAMILY PP2C-like 104 363 IPR036457 -
Prci8g0804 366 Pfam Protein phosphatase 2C 105 354 IPR001932 -
Prci8g0804 366 CDD PP2Cc 103 362 IPR001932 -
Prci8g0804 366 Gene3D - 93 365 IPR036457 -
Prci8g0804 366 SMART PP2C_4 95 360 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0804 Prci-Chr8 5101893 5104273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0804 1 365 PP2C-type Phosphatase Gene Family AT2G30020 58.025 1.33e-148 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0804 K17506 - gmx:100797934 479.559