Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0792 ATGTCCACCTCTACTCAGTCTGCTGACTCACCCACCAACCCTCTGGCCCAAATGCTTCAGAGCATCTTCTCCGACAACAGCAACATCATGCTCGCCGCCATCATTTCCCTCCTCCTCGTCATCCTCTTCGTCCTCCTACTCCATCTCTACGCCAAATGGTTCCTAGCCCACGCTCATGCCCAGCCCCAAGCCCGCCGCCGCCGCCGCAGGCGTCGCCCAGCCTCCGTCACCGTCTCCGACGTTATCGGTCCCGCCCGCTTTCACCATTTCCGCAGCTTCAATCTTCAAGACTCCCCCATTTCCAATCCCCCCACCAAAAGGCTGGATTCCGAGTCCATTGCCGCGATTCCTGTATTCGTCTACGAAGCAGAGACGGTGAAGGAGAGTGATGACCGAGAGTTGGAATGCGTGATTTGCTTGGGCGTCTTTAGAAATGGAGAAACCGGCAGGAGCTTGCCCAAGTGTGGCCATGCTTTTCATGTGGAGTGTATCGATATGTGGTTGAGTTCGCATTCGAATTGCCCAATCTGCAGGGCTCCGATCGTGGAGCATGACTCTCAATCGGGTTCTATTCCTGAGGATGATTCCTCTGCTGTGCTTGAGATTGTGATCGATTCTGCCGGTTCTGAGATCAGCGAGAATGACCGTGGGACTGAGAGTAGTACTAATAATGATAATGATAATGGTGGGGCAAGTGACTCGGTTATTTCTGTATCAGAAACTTCATCCTCAGTGTTGGGTTGTTCTTTGAAGAGGATGCTCAGTAAAGTTTTTCCTTCTTCCAATGCCAGTGAGTTAAACACATGA 807 0.5204 MSTSTQSADSPTNPLAQMLQSIFSDNSNIMLAAIISLLLVILFVLLLHLYAKWFLAHAHAQPQARRRRRRRRPASVTVSDVIGPARFHHFRSFNLQDSPISNPPTKRLDSESIAAIPVFVYEAETVKESDDRELECVICLGVFRNGETGRSLPKCGHAFHVECIDMWLSSHSNCPICRAPIVEHDSQSGSIPEDDSSAVLEIVIDSAGSEISENDRGTESSTNNDNDNGGASDSVISVSETSSSVLGCSLKRMLSKVFPSSNASELNT 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0792 268 SUPERFAMILY RING/U-box 126 184 - -
Prci8g0792 268 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 22 183 IPR044675 -
Prci8g0792 268 MobiDBLite consensus disorder prediction 210 236 - -
Prci8g0792 268 ProSiteProfiles Zinc finger RING-type profile. 136 178 IPR001841 -
Prci8g0792 268 Pfam Ring finger domain 135 178 IPR001841 -
Prci8g0792 268 FunFam RING-H2 finger protein ATL1 96 183 - -
Prci8g0792 268 SMART ring_2 136 177 IPR001841 -
Prci8g0792 268 CDD RING-H2_EL5-like 135 178 - -
Prci8g0792 268 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 96 183 IPR013083 -
Prci8g0792 268 MobiDBLite consensus disorder prediction 211 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0792 Prci-Chr8 5022846 5024199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0792 23 179 Rapid Response to Elicitors AT3G16720 35.669 7.01e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0792 - - qsa:O6P43_014072 269.626