Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0780 ATGGACCGTCGTTGGCCCTGGAAGAAAAAATCATCTGATAAGACTGTGCTCGAGAGAGCAGCGGCTGCATTGGACTCGGCCAGTGCTTCTGCTCAGGGCAGTCAGAATCAGGATAATTACAAGAAGCCAAACTATGTGCAAATTTCTGTGGAGTCATATTCACATCTGACTAGCTTGGAGGACCAAGTGAAGACATTTGAGGAAAAAGTACAGACATTGGAAGATGAGGCCAAAGAATTGACTGAAAAGCTGTCAGTGGCGAACTCAGAGATAACTACCAAGGAAAGCCTTGTAAAACAGCATGCTAAAGTAGCTGAAGAAGCTGTCTCAGGCTGGGAAAAGGCAGAAGCGGAAGCTTTGGCATTGAAGAATCATCTAGAATCTGTTACACTCTCAAAGCTCACCGCTGAGGATCGAGCATCACATTTAGATGGTGCTCTTAAGGAGTGTATGCGACAGATAAGAAACCTAAAGGAAGAACACGAGCAGAAAATACAGGAAGTTGCTCTCACCAAAACCAAGCAATTAGATAAAATTAAGGGTGAGCTTGACGCAAAGATAGTTAACTTAGAACAGGAACTTCTAAGGTCTGCTGCTGAAAATGGGGCTCTTTCAAGGTCTTTACAGGAGCGCTCTAACATGTTGATCAAAATTAGTGAAGAAAAGGCTCAGGTTGAAGCTGAAATTGAGCATTTGAAGGGCAACATAGAATCATGTGAAAGGGAAATCAATTCACTGAAGTATGAACTTCACGTTGTTTCTAAGGAGCTGGAAATTCGTAACGAAGAAAAGAACATGAGTATGAGGTCTGCAGAAGCTGCCAACAAGCAGCATGCTGAGGGTGTTAAAAAAATTGCAAAGTTAGAGGCCGAGTGCCAAAGATTACGAGGTCTGGTGCGGAAGAAGCTACCTGGTCCTGCTGCACTTGCACAAATGAAGATGGAAGTTGAGAATCTTGGCCGAGACTTTGGAGAAACCCGATCAAGGAGGTCTTCTGTTAAGCCTGCTAGTCCTCATTTTTCCCCACCGCCTGATTTCTCCCTTGAGAATATTCAGAAATTTCAGAAGGAAAATGAATTTCTTACAGAGCGTTTATTGACAATGGAAGAAGAAACAAAGATGCTCAAAGAAGCTTTGGCAAAACGTAACAGTGAATTGCAGGCCTCAAGGAGCATGTGTGCTAAAACTCTATGTAAGCTTCAAAGTTTGGAAGCACAACTTCAGCCAAATGACCAGCTTAAAGGATCTCCAAAATCCATCATCCAGATAACCCATGAAAGTATTTATGGTCAAAATGCAAGAAATGCACCAAGCTTAACCTCCATGTCTGAAGATGGAAACGATGATGTTGGAAAATGTGCTGAGTCTTGGTCCACGGCATCAATATCAGAACTATCCCAATCCCAAAAAGAAAACAATATTGAGAAATCAGGCATATCTGAGGCCACTAATAACTTGGAACTGATGGATGACTTTCTGGAGGTGGAGAAATTGGCCTGTCTGTCAAATAACTCCAATGGTTCTGTTTCAATTTCTTCGAGCAATTCAACTGAAATGATCAACCATGTATCAGAAGGCAGCACTTGCATTAATGGTTCCTCTGAAAAGCAGAGTGATTTGAATCCATTACCCAATCAAGTGTCTTCTGGTGAAGTGTTGTCAGCTCCTGATCTCCAGTCTGATGTTGATTGCTTGTCACTGACAGAGCTTCGATCAAGAATTTTGATGGTTTTTGAGTCGATGTCTAGCGATACTGATAAAGGGAATATCCTTGAAGATATTAAAAATATTTTGGAAGATGCACGTGATGCTTCCAACAAGCATTCTGTTGAATACATACCCCAGGATGTCCATCCTGCTGATGCTACATGTGATAGGCAGGAAAATTCAGAAGTTGTTGGCTCACATCTTGGGAGGGACATCATTTCATCGAAGCAAGCAACAGAACACATGCAGATGACCGCAGACTTGGAAGCTGCAATTTCTCATATTCACGACTTTGTGCTGTTCCTAGGTAAAGAAGCAATGTCAGTTCATGACATTTCATCTGATGGAGTAAAGCTAAAGATTGAGGAATTTTCTCACACCTTTAATAAAGTCATATGCAATGAAGCAACTTTACTGCAGTTTGTTTTTGATTTGTCATATGTATTAGCTAAGGCAAGTGAATTCAGATTTAATGTCCTTGGCTACAAGGGTACAGAAGCTGAAACTAACAGTCCTGATTGCATTGACAAGATTGCTTTGCCAGAAAATAAGTTAGTTCAAAGCAGTCCGTCAGGAGAAAGATATCCAAATGGCTGTTCCCATATTCTTAATCCTTGTGCTGATCCTCAGGTTCCTGATGATGGAAATTTGATCTCTACCTATGAATCAAACGGTACTTCACACCAAATCTCATTGAAGAAGTTTGAAGAATTGAAACTAGAGAAAGAGAAGACAGCAACGGATCTGGCAAGATGCACTGAAAATCTTGAAACGACAAAGTCTCAATTACAAGAGACGGAGCAACTTTTGGCAGAAGTGAAATCACAACTGGCTTCTTCTCAAAGATCAAACAGCTTGGCTGAGACGCAGCTAAAATGTATGGCAGAGTCATACAGGACCCTTGAAACACGTGCACAGGAATTAGAAACTGAGCTGAATCTTCTGCGAGTCAAGGCAGAATCTCTGGAGAATGAACTTCAAGATGAAAAGAGGGGTCGTGAAGATGCTGTGGTCAAGTGCAAGGACCTAGAAGAGCAATTGCAAAGGTATGAGAGCTCAGCAGCTGATAATGATCTCAAAACTAAGCAGGAGAAAGATTTGGCAGCTGCAGCGGAAAAGCTAGCAGAGTGTCAGGAAACGATATTTCTCCTTGGCAAGCAGCTAAAAGCTCTTCGCCCTCCGACAGAGCAGAGTGGATCGCCGTACAGTGAGAGAAGTTCGAAGGTTGATGAAGGGCTTTCAGAGGAGGAGCCTACTATTAGTAACCCAAACTTGCAAGAGTTAGATGAGATGGACAGTGCTAGTTCGGCATTTGTGCAAAGATTGGGTCCAGAGTCCCCCTTGTATTCCTCCAACAGCCTTTGTCCATCTGACAATGAAGCAAACCTTGCCCCCATATCTCCAGCAAAGCATCCAAGACACAGGCCTACCAAATCGGCCTCCTCCTCCGTTTCTTCTGCCCCCACGCCGGAGAAACTTGCGCAGGCCCGAGGATTTAGTAGATTCTTTTCATCAAAAGGGAAAAATGGGCGCTAA 3243 0.428 MDRRWPWKKKSSDKTVLERAAAALDSASASAQGSQNQDNYKKPNYVQISVESYSHLTSLEDQVKTFEEKVQTLEDEAKELTEKLSVANSEITTKESLVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLSKLTAEDRASHLDGALKECMRQIRNLKEEHEQKIQEVALTKTKQLDKIKGELDAKIVNLEQELLRSAAENGALSRSLQERSNMLIKISEEKAQVEAEIEHLKGNIESCEREINSLKYELHVVSKELEIRNEEKNMSMRSAEAANKQHAEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKMEVENLGRDFGETRSRRSSVKPASPHFSPPPDFSLENIQKFQKENEFLTERLLTMEEETKMLKEALAKRNSELQASRSMCAKTLCKLQSLEAQLQPNDQLKGSPKSIIQITHESIYGQNARNAPSLTSMSEDGNDDVGKCAESWSTASISELSQSQKENNIEKSGISEATNNLELMDDFLEVEKLACLSNNSNGSVSISSSNSTEMINHVSEGSTCINGSSEKQSDLNPLPNQVSSGEVLSAPDLQSDVDCLSLTELRSRILMVFESMSSDTDKGNILEDIKNILEDARDASNKHSVEYIPQDVHPADATCDRQENSEVVGSHLGRDIISSKQATEHMQMTADLEAAISHIHDFVLFLGKEAMSVHDISSDGXVKLKIEEFSHTFNKVICNEATLLQFVFDLSYVLAKASEFRFNVLGYKGTEAETNSPDCIDKIALPENKLVQSSPSGERYPNGCSHILNPCADPQVPDDGNLISTYESNGTSHQISLKKFEELKLEKEKTATDLARCTENLETTKSQLQETEQLLAEVKSQLASSQRSNSLAETQLKCMAESYRTLETRAQELETELNLLRVKAESLENELQDEKRGREDAVVKCKDLEEQLQRYESSAADNDLKTKQEKDLAAAAEKLAECQETIFLLGKQLKALRPPTEQSGSPYSERSSKVDEGLSEEEPTISNPNLQELDEMDSASSAFVQRLGPESPLYSSNSLCPSDNEANLAPISPAKHPRHRPTKSASSSVSSAPTPEKLAQARGFSRFFSSKGKNGR 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0780 1081 Coils Coil 140 174 - -
Prci8g0780 1081 Coils Coil 56 90 - -
Prci8g0780 1081 Coils Coil 861 950 - -
Prci8g0780 1081 SUPERFAMILY Tropomyosin 806 963 - -
Prci8g0780 1081 MobiDBLite consensus disorder prediction 328 347 - -
Prci8g0780 1081 MobiDBLite consensus disorder prediction 1015 1030 - -
Prci8g0780 1081 Coils Coil 805 853 - -
Prci8g0780 1081 Coils Coil 180 200 - -
Prci8g0780 1081 Coils Coil 215 291 - -
Prci8g0780 1081 Pfam Filament-like plant protein, long coiled-coil 94 966 IPR008587 -
Prci8g0780 1081 Coils Coil 351 378 - -
Prci8g0780 1081 MobiDBLite consensus disorder prediction 987 1003 - -
Prci8g0780 1081 MobiDBLite consensus disorder prediction 962 1081 - -
Prci8g0780 1081 MobiDBLite consensus disorder prediction 963 977 - -
Prci8g0780 1081 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1076 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0780 Prci-Chr8 4953940 4959857 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0780 - - gmx:100789174 1442.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0115 2 901487 907646 Prci8g0780 8 4953940 4959857 CCT
Prci8g0780 8 4953940 4959857 Prci8g0780 8 4953940 4959857 ECH