Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0738 ATGTCAACTTTGTCAGAAAAAGGTGAAGCAGCTTATGCTGAAGCAGGAAAAGTGGCAGAAGAGGTAATTTCTCAAGTTCGTACAGTGTACTCTTTCGTGGGAGAAGATAAAGCAGTCGCCTCATACTCGAAATCACTTGACAATGGTCTGAAGCTGGGGAAGAAGAGTGGCCTTGCAAAAGGAGTTGGGGTAGGCTTAACATACGGACTGTTGTTTTGTGCTTGGGCATTGCTTCTTTGGTATGCAGGCATACTCGTGAGACACCATAAAACAAATGGAGGGAAAGCATTCACAACTATCATTAATGTCATCTTTAGTGGATTTGCTCTCGGCCAGGCTGCTCCTAACCTTGCAGCCATTGCTAAAGGGCGAGCAGCAGCAGCCAACATCATGAATATGATTGCATCAGTTTCAAACACATCTACAAGTTTGGACAAGGGGATTGTTTTGCCACATGTGGCAGGGAAAATGGAATTTCGTGAGGTCTGCTTTTCTTACCCATCAAGATCAAACTTGGTCTTTGAAAATTTGACCTTCACAGTAACTTCTGGGAAGACTATCGCAGTTGTTGGTCCTAGTGGTTCAGGAAAGAGCACTATCATTTGTATGATTCAAAGATTTTATGATCCCACCTCAGGTAGGATACTATTGGATGGGCACGATCTTAAGAGTCTTCAGTTGAAATGGTTGAGGGAACAAATGGGTTTGGTTAGTCAAGAACCAGCGCTATTTGCCACAACAATATCTGAAAATATTTTACTTGGAAACGAGTATGCAAACATGGATCAAATCATACAAGCAGCGAAAGCTGCAAATGCCCATTCTTTCATTGAAGGCTTACCTGATGGTTATTTGACTCCGGTTGGAGAGGGGGGCACGCAACTTTCAGGGGGGCAGAAACAGAGAATTGCAATAGCAAGAGCGATGCTCAGAAACCCAAAGGTGTTACTTCTGGATGAGGCCACTAGTGCTCTTGATGCAGAATCAGAATTGATAGTTCAACAGGCTCTGGAAAAATTAATGTCAAATCGAACTACAATTATTGTTGCCCACAGATTATCCACCATTCGTGACGTTGATACAATCTTGGTGTTGAAGAACGGTCAGGTTGTAGAAAGCGGGACTCATTCACAATTGATGTCAAAAAAAGGAGACTACATGCATTTAGTGAACTTGCAAGCCTCAGACAACCCCATGACAAGTTCAAGTGCAATATCTCGATCTGGAAGTTCAAGACATTCAAGTTTTCGAGAAGTTTCAGACAACCAAAAATATCCAGATGAGTTGAAGTCCATTTCAACAAGAGAGCCTCAACCTGGTGACCAAAAGTCCATTCCATCAATCTTGGACCTGCTAAAACTAAATGCTCCTGAATGGCCTTATGCAATACTTGGATCAGTGGGTGCAATTATGGCAGGCATGGAAGCTCCTCTCTTTGCTCTTGGTATTACTCATATTTTGACTGCGTTCTACTCCCCACATGGTTCTAAAATCAAGCAAGAGGTTGATCGGGTGGCTCTGATATTCGTTGGAGTTGCTGCTGTGACTATACCTATTTACCTGTTACAACATTACTTTTTTACATTGATGGGAGAGCGTCTCACAGCCCGTGTACGGTTATTAATGTTTTCAGCTATCCTAACCAATGAAATAGCATGGTTCGACTTGGACGAGAACAACACGGGATCATTAACAGCTATGCTAGCCGCAGATGCAACATTAGTAAGAAGTGCTTTGGCTGACAGACTCTCTACCATTGTACAAAATGTAGCTCTCACTGTGACAGCATTTGTTATTGCCTTCACATTGAGTTGGAGACTAACAGCTGTGGTTGTATCTTGCCTGCCTCTTCTTATTGGGGCGTCTATCACTGAACAACTATTTCTCAAGGGGTTCGGGGGAGATTACAGTGCTTCCTACTCTAGAGCAACTTCTTTGGCACGTGAAGCTATCTCCAATATACGAACTGTTGCTGCTTTTGGTGCAGAAGATCGAATCTCATTCCAATTTTCCTCTGAATTGAACAAACCTAACAGGCAAGCACTTTTGCGAGGCCACATCTCAGGCTTTGGTTATGGTGTGACGCAATTGTTTGCTTTTTGCTCTTATGCACTTGGCCTCTGGTATGCATCCATCTTGATCAAGCATAAAGAGTCTAACTTTGGAGACATTATGAAGTCTTTTATGGTTTTGATCATCACGGCTCTGGCAATAGCAGAAACACTAGCTCTTACCCCGGACATTGTCAAAGGATCACAAGTTCTGGGGTCAGTTTTTGGAATTCTCCGAAGGAGAACATCCATCCCTCCCAATGAACCTAACTCAAAGGTGATGACTGATATGAAAGGAGAGATAGAGCTTAAAAATGTACACTTTAGCTATCCAATGAGACCTAACATCACCATTTTTGAAAACTTAAACCTAAAAATCAGAGCAGGAAAGAGTCTTGCGGTAGTTGGGCAGAGTGGCTCTGGGAAGAGTACTGTGATCTCTCTGGTCATGAGATTTTACGACCCAACTTATGGAAAGGTCTTAATTGATGGATGTGATATCAAAAGCCTCAACTTGAGATCCATAAGGCTGAGAATAGGTCTAGTTCAACAAGAACCTGCTTTATTCTCCTCCACGGTATATGAAAACATCAAGTATGGAAAAGAAGAGGCCTCAGAAGTTGAAATAATGAAGGCCGCGAAAGCAGCAAATGCTCATGAGTTCATCGTCAGAATGCCAAAAGGGTATCAAACAGAGGTAGGTGAGAGAGGAGTGCAATTATCAGGAGGCCAGAAACAGAGGGTGGCAATTGCTCGAGCTATTCTAAAAGACCCATCTATTCTCTTATTAGATGAAGCAACAAGTGCATTAGACACAGTTTCAGAGAGATTCGTCCAAGAGGCTCTAGAGAAGCTTATGGAAGGACGAACAACCATCTTGGTAGCACACAGGTTATCAACAGTCCGAAATGCACACAACATTGCTGTGTTACAAAATGGCAAAGTGGCTGAAATGGGCAGCCATGAGAGTCTGATTGCTCAACCTGAAAGCATTTATAAGCAGTTGGTCCGTCTTCAACAAGATAATAGTGACCAAGTACTGAATTGA 3099 0.4269 MSTLSEKGEAAYAEAGKVAEEVISQVRTVYSFVGEDKAVASYSKSLDNGLKLGKKSGLAKGVGVGLTYGLLFCAWALLLWYAGILVRHHKTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGRAAAANIMNMIASVSNTSTSLDKGIVLPHVAGKMEFREVCFSYPSRSNLVFENLTFTVTSGKTIAVVGPSGSGKSTIICMIQRFYDPTSGRILLDGHDLKSLQLKWLREQMGLVSQEPALFATTISENILLGNEYANMDQIIQAAKAANAHSFIEGLPDGYLTPVGEGGTQLSGGQKQRIAIARAMLRNPKVLLLDEATSALDAESELIVQQALEKLMSNRTTIIVAHRLSTIRDVDTILVLKNGQVVESGTHSQLMSKKGDYMHLVNLQASDNPMTSSSAISRSGSSRHSSFREVSDNQKYPDELKSISTREPQPGDQKSIPSILDLLKLNAPEWPYAILGSVGAIMAGMEAPLFALGITHILTAFYSPHGSKIKQEVDRVALIFVGVAAVTIPIYLLQHYFFTLMGERLTARVRLLMFSAILTNEIAWFDLDENNTGSLTAMLAADATLVRSALADRLSTIVQNVALTVTAFVIAFTLSWRLTAVVVSCLPLLIGASITEQLFLKGFGGDYSASYSRATSLAREAISNIRTVAAFGAEDRISFQFSSELNKPNRQALLRGHISGFGYGVTQLFAFCSYALGLWYASILIKHKESNFGDIMKSFMVLIITALAIAETLALTPDIVKGSQVLGSVFGILRRRTSIPPNEPNSKVMTDMKGEIELKNVHFSYPMRPNITIFENLNLKIRAGKSLAVVGQSGSGKSTVISLVMRFYDPTYGKVLIDGCDIKSLNLRSIRLRIGLVQQEPALFSSTVYENIKYGKEEASEVEIMKAAKAANAHEFIVRMPKGYQTEVGERGVQLSGGQKQRVAIARAILKDPSILLLDEATSALDTVSERFVQEALEKLMEGRTTILVAHRLSTVRNAHNIAVLQNGKVAEMGSHESLIAQPESIYKQLVRLQQDNSDQVLN 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0738 1032 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 157 392 IPR003439 GO:0005524
Prci8g0738 1032 FunFam ABC transporter B family member 4 775 1029 - -
Prci8g0738 1032 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 393 IPR027417 -
Prci8g0738 1032 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 122 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci8g0738 1032 CDD ABC_MTABC3_MDL1_MDL2 158 393 - -
Prci8g0738 1032 Gene3D - 775 1031 IPR027417 -
Prci8g0738 1032 SMART AAA_5 183 369 IPR003593 GO:0016887
Prci8g0738 1032 SMART AAA_5 812 998 IPR003593 GO:0016887
Prci8g0738 1032 MobiDBLite consensus disorder prediction 397 423 - -
Prci8g0738 1032 Gene3D - 155 418 IPR027417 -
Prci8g0738 1032 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 774 1023 IPR027417 -
Prci8g0738 1032 FunFam ABC transporter B family member 4 147 400 - -
Prci8g0738 1032 Pfam ABC transporter transmembrane region 2 106 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci8g0738 1032 Pfam ABC transporter transmembrane region 464 736 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci8g0738 1032 Gene3D ABC transporter type 1, transmembrane domain 1 758 IPR036640 GO:0005524|GO:0016020
Prci8g0738 1032 Pfam ABC transporter 804 952 IPR003439 GO:0005524
Prci8g0738 1032 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 785 1021 IPR003439 GO:0005524
Prci8g0738 1032 SUPERFAMILY ABC transporter transmembrane region 4 134 IPR036640 GO:0005524|GO:0016020
Prci8g0738 1032 Pfam ABC transporter 175 323 IPR003439 GO:0005524
Prci8g0738 1032 SUPERFAMILY ABC transporter transmembrane region 450 763 IPR036640 GO:0005524|GO:0016020
Prci8g0738 1032 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 463 750 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci8g0738 1032 CDD ABC_6TM_Pgp_ABCB1_D2_like 452 768 - -
Prci8g0738 1032 ProSitePatterns ABC transporters family signature. 295 309 IPR017871 GO:0005524|GO:0016887
Prci8g0738 1032 PANTHER ABC TRANSPORTER B FAMILY 467 1022 IPR039421 -
Prci8g0738 1032 CDD ABC_MTABC3_MDL1_MDL2 785 1023 - -
Prci8g0738 1032 ProSitePatterns ABC transporters family signature. 924 938 IPR017871 GO:0005524|GO:0016887
Prci8g0738 1032 MobiDBLite consensus disorder prediction 397 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0738 Prci-Chr8 4716179 4720387 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0738 1 1031 Calmodulin-binding Proteins AT2G36910 49.906 0.0 1029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0738 K05658 - gmx:100787093 1633.62