Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0737 ATGCAAACAGGGGAGAGGCAAACAGCTCGTTTGCGTTTTAAGTATCTACAATCAGTTCTAAAAAAGGATATCAATTTCTTTGACAATGAAGCAAGAGATGCTAATATCATTTTCCACATTTCAAGTGATGCAATATTGGTACAAGATGCAATCGGTGACAAGACAGGTCATGCTATACGTTACCTTTCACAATTCGTTGTTGGATTTGCCATTGGATTTGCGTCAGTGTGGCAGCTTACACTGCTCACTTTGGCTGTAGTTCCATTAATAGCAGTAGCCGGGGGAGCTTATACTATAACCATGTCAACTTTGTCAGAAAAAGGTGAAGCAGCTTATGCTGAAGCAGGAAAAGTGGCAGAAGAGGTAATTTCTCAAGTTCGTACAGTGTACTCTTTCGTGGGAGAAGATAAAGCAGTCGCCTCATACTCGAAATCACTTGACAATGGTCTGAAGCTGGGGAAGAAGAGTGGCCTTGCAAAAGGAGTTGGGGTAGGCTTAACATACGGACTGTTGTTTTGTGCTTGGGCATTGCTTCTTTGGTATGCAGGCATACTCGTGAGACACCATAAAACAAATGGAGGGAAAGCATTCACAACTATCATTAATGTCATCTTTAGTGGATTTGCTCTCGGCCAGGCTGCTCCTAACCTTGCAGCCATTGCTAAAGGGCGAGCAGCAGCAGCCAACATCATGAATATGATTGCATCAGTTTCAAACACATCTACAAGTTTGGACAAGGGGATTGTTTTGCCACATGTGGCAGGGAAAATGGAATTTCGTGAGGTCTGCTTTTCTTACCCATCAAGATCAAACTTGGTCTTTGAAAATTTGACCTTCACAGTAACTTCTGGGAAGACTATCGCAGTTGTTGGTCCTAGTGGTTCAGGAAAGAGCACTATCATTTGTATGATTCAAAGATTTTATGATCCCACCTCAGGTAGGATACTATTGGATGGGCACGATCTTAAGAGTCTTCAGTTGAAATGGTTGAGGGAACAAATGGGTTTGGTTAGTCAAGAACCAGCGCTATTTGCCACAACAATATCTGAAAATATTTTACTTGGAAACGAGTATGCAAACATGGATCAAATCATACAAGCAGCGAAAGCTGCAAATGCCCATTCTTTCATTGAAGGCTTACCTGATGGTTATTTGACTCCGGTTGGAGAGGGGGGCACGCAACTTTCAGGGGGGCAGAAACAGAGAATTGCAATAGCAAGAGCGATGCTCAGAAACCCAAAGGTGTTACTTCTGGATGAGGCCACTAGTGCTCTTGATGCAGAATCAGAATTGATAGTTCAACAGGCTCTGGAAAAATTAATGTCAAATCGAACTACAATTATTGTTGCCCACAGATTATCCACCATTCGTGACGTTGATACAATCTTGGTGTTGAAGAACGGTCAGGTTGTAGAAAGCGGGACTCATTCACAATTGATGTCAAAAAAAGGAGACTACATGCATTTAGTGAACTTGCAAGCCTCAGACAACCCCATGACAAGTTCAAGTGCAATATCTCGATCTGGAAGTTCAAGACATTCAAGTTTTCGAGAAGTTTCAGACAACCAAAAATATCCAGATGAGTTGAAGTCCATTTCAACAAGAGAGCCTCAACCTGGTGACCAAAAGTCCATTCCATCAATCTTGGACCTGCTAAAACTAAATGCTCCTGAATGGCCTTATGCAATACTTGGATCAGTGGGTGCAATTATGGCAGGCATGGAAGCTCCTCTCTTTGCTCTTGGTATTACTCATATTTTGACTGCGTTCTACTCCCCACATGGTTCTAAAATCAAGCAAGAGGTTGATCGGGTGGCTCTGATATTCGTTGGAGTTGCTGCTGTGACTATACCTATTTACCTGTTACAACATTACTTTTTTACATTGATGGGAGAGCGTCTCACAGCCCGTGTACGGTTATTAATGTTTTCAGCTATCCTAACCAATGAAATAGCATGGTTCGACTTGGACGAGAACAACACGGGATCATTAACAGCTATGCTAGCCGCAGATGCAACATTAGTAAGAAGTGCTTTGGCTGACAGACTCTCTACCATTGTACAAAATGTAGCTCTCACTGTGACAGCATTTGTTATTGCCTTCACATTGAGTTGGAGACTAACAGCTGTGGTTGTATCTTGCCTGCCTCTTCTTATTGGGGCGTCTATCACTGAACAACTATTTCTCAAGGGGTTCGGGGGAGATTACAGTGCTTCCTACTCTAGAGCAACTTCTTTGGCACGTGAAGCTATCTCCAATATACGAACTGTTGCTGCTTTTGGTGCAGAAGATCGAATCTCATTCCAATTTTCCTCTGAATTGAACAAACCTAACAGGCAAGCACTTTTGCGAGGCCACATCTCAGGCTTTGGTTATGGTGTGACGCAATTGTTTGCTTTTTGCTCTTATGCACTTGGCCTCTGGTATGCATCCATCTTGATCAAGCATAAAGAGTCTAACTTTGGAGACATTATGAAGTCTTTTATGGTTTTGATCATCACGGCTCTGGCAATAGCAGAAACACTAGCTCTTACCCCGGACATTGTCAAAGGATCACAAGTTCTGGGGTCAGTTTTTGGAATTCTCCGAAGGAGAACATCCATCCCTCCCAATGAACCTAACTCAAAGGTGATGACTGATATGAAAGGAGAGATAGAGCTTAAAAATGTACACTTTAGCTATCCAATGAGACCTAACATCACCATTTTTGAAAACTTAAACCTAAAAATCAGAGCAGGAAAGAGTCTTGCGGTAGTTGGGCAGAGTGGCTCTGGGAAGAGTACTGTGATCTCTCTGGTCATGAGATTTTACGACCCAACTTATGGAAAGGTCTTAATTGATGGATGTGATATCAAAAGCCTCAACTTGAGATCCATAAGGCTGAGAATAGGTCTAGTTCAACAAGAACCTGCTTTATTCTCCTCCACGGTATATGAAAACATCAAGTATGGAAAAGAAGAGGCCTCAGAAGTTGAAATAATGAAGGCCGCGAAAGCAGCAAATGCTCATGAGTTCATCGTCAGAATGCCAAAAGGGTATCAAACAGAGGTAGGTGAGAGAGGAGTGCAATTATCAGGAGGCCAGAAACAGAGGGTGGCAATTGCTCGAGCTATTCTAAAAGACCCATCTATTCTCTTATTAGATGAAGCAACAAGTGCATTAGACACAGTTTCAGAGAGATTCGTCCAAGAGGCTCTAGAGAAGCTTATGGAAGGACGAACAACCATCTTGGTAGCACACAGGTTATCAACAGTCCGAAATGCACACAACATTGCTGTGTTACAAAATGGCAAAGTGGCTGAAATGGGCAGCCATGAGAGTCTGATTGCTCAACCTGAAAGCATTTATAAGCAGTTGGTCCGTCTTCAACAAGATAATAGTGACCAAGTACTGAATTGA 3399 0.4248 MQTGERQTARLRFKYLQSVLKKDINFFDNEARDANIIFHISSDAILVQDAIGDKTGHAIRYLSQFVVGFAIGFASVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYAEAGKVAEEVISQVRTVYSFVGEDKAVASYSKSLDNGLKLGKKSGLAKGVGVGLTYGLLFCAWALLLWYAGILVRHHKTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGRAAAANIMNMIASVSNTSTSLDKGIVLPHVAGKMEFREVCFSYPSRSNLVFENLTFTVTSGKTIAVVGPSGSGKSTIICMIQRFYDPTSGRILLDGHDLKSLQLKWLREQMGLVSQEPALFATTISENILLGNEYANMDQIIQAAKAANAHSFIEGLPDGYLTPVGEGGTQLSGGQKQRIAIARAMLRNPKVLLLDEATSALDAESELIVQQALEKLMSNRTTIIVAHRLSTIRDVDTILVLKNGQVVESGTHSQLMSKKGDYMHLVNLQASDNPMTSSSAISRSGSSRHSSFREVSDNQKYPDELKSISTREPQPGDQKSIPSILDLLKLNAPEWPYAILGSVGAIMAGMEAPLFALGITHILTAFYSPHGSKIKQEVDRVALIFVGVAAVTIPIYLLQHYFFTLMGERLTARVRLLMFSAILTNEIAWFDLDENNTGSLTAMLAADATLVRSALADRLSTIVQNVALTVTAFVIAFTLSWRLTAVVVSCLPLLIGASITEQLFLKGFGGDYSASYSRATSLAREAISNIRTVAAFGAEDRISFQFSSELNKPNRQALLRGHISGFGYGVTQLFAFCSYALGLWYASILIKHKESNFGDIMKSFMVLIITALAIAETLALTPDIVKGSQVLGSVFGILRRRTSIPPNEPNSKVMTDMKGEIELKNVHFSYPMRPNITIFENLNLKIRAGKSLAVVGQSGSGKSTVISLVMRFYDPTYGKVLIDGCDIKSLNLRSIRLRIGLVQQEPALFSSTVYENIKYGKEEASEVEIMKAAKAANAHEFIVRMPKGYQTEVGERGVQLSGGQKQRVAIARAILKDPSILLLDEATSALDTVSERFVQEALEKLMEGRTTILVAHRLSTVRNAHNIAVLQNGKVAEMGSHESLIAQPESIYKQLVRLQQDNSDQVLN 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0737 1132 CDD ABC_6TM_Pgp_ABCB1_D2_like 552 868 - -
Prci8g0737 1132 FunFam ABC transporter B family member 4 247 500 - -
Prci8g0737 1132 ProSitePatterns ABC transporters family signature. 1024 1038 IPR017871 GO:0005524|GO:0016887
Prci8g0737 1132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 874 1123 IPR027417 -
Prci8g0737 1132 ProSitePatterns ABC transporters family signature. 395 409 IPR017871 GO:0005524|GO:0016887
Prci8g0737 1132 Gene3D - 255 518 IPR027417 -
Prci8g0737 1132 FunFam ABC transporter B family member 4 875 1129 - -
Prci8g0737 1132 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 885 1121 IPR003439 GO:0005524
Prci8g0737 1132 Gene3D ABC transporter type 1, transmembrane domain 2 852 IPR036640 GO:0005524|GO:0016020
Prci8g0737 1132 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 222 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci8g0737 1132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 248 493 IPR027417 -
Prci8g0737 1132 CDD ABC_MTABC3_MDL1_MDL2 885 1123 - -
Prci8g0737 1132 MobiDBLite consensus disorder prediction 497 516 - -
Prci8g0737 1132 Pfam ABC transporter 275 423 IPR003439 GO:0005524
Prci8g0737 1132 Pfam ABC transporter transmembrane region 2 206 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci8g0737 1132 Pfam ABC transporter transmembrane region 564 836 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci8g0737 1132 SMART AAA_5 912 1098 IPR003593 GO:0016887
Prci8g0737 1132 SMART AAA_5 283 469 IPR003593 GO:0016887
Prci8g0737 1132 PANTHER ABC TRANSPORTER B FAMILY 1 616 IPR039421 -
Prci8g0737 1132 CDD ABC_MTABC3_MDL1_MDL2 258 493 - -
Prci8g0737 1132 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 257 492 IPR003439 GO:0005524
Prci8g0737 1132 Gene3D - 875 1131 IPR027417 -
Prci8g0737 1132 SUPERFAMILY ABC transporter transmembrane region 3 234 IPR036640 GO:0005524|GO:0016020
Prci8g0737 1132 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 563 850 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci8g0737 1132 CDD ABC_6TM_Pgp_ABCB1_D1_like 1 217 - -
Prci8g0737 1132 SUPERFAMILY ABC transporter transmembrane region 550 863 IPR036640 GO:0005524|GO:0016020
Prci8g0737 1132 MobiDBLite consensus disorder prediction 497 523 - -
Prci8g0737 1132 Pfam ABC transporter 904 1052 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0737 Prci-Chr8 4716179 4722207 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0737 1 1131 Calmodulin-binding Proteins AT2G36910 50.431 0.0 1154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0737 K05658 - gmx:100787093 1817.74