Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0736 ATGGAAGAAGTGGAACTTGCCTCCCATTTGCAATCAGAACAAAACCAACAGTCCAAAGCAAGTAAACCAGAGGGTGTTTCCTTCTTTGGCTTGTTCGCTGCTGCTGATACAATTGACTGTGTCTTGATGTTCTTGGGAAGTCTTGGTGCGTTCGTTCATGGCTCCGCTCTTCCTGTATTCTTCATCTTGTTCGGTCGTATGATTGATTCTTTAGGACATCTTTCTAAGCATCCTCATAAGTTGTCGTCACGCATTTCTGAGAATGCTTTGTACTTGGTCTATCTTGGAATGGTTGTTCTGGCATCAGCTTGGATGGGGGTTGCATTTTGGATGCAAACAGGGGAGAGGCAAACAGCTCGTTTGCGTTTTAAGTATCTACAATCAGTTCTAAAAAAGGATATCAATTTCTTTGACAATGAAGCAAGAGATGCTAATATCATTTTCCACATTTCAAGTGATGCAATATTGGTACAAGATGCAATCGGTGACAAGACAGGTCATGCTATACGTTACCTTTCACAATTCGTTGTTGGATTTGCCATTGGATTTGCGTCAGTGTGGCAGCTTACACTGCTCACTTTGGCTGTAGTTCCATTAATAGCAGTAGCCGGGGGAGCTTATACTATAACCATGTCAACTTTGTCAGAAAAAGGTGAAGCAGCTTATGCTGAAGCAGGAAAAGTGGCAGAAGAGGTAATTTCTCAAGTTCGTACAGTGTACTCTTTCGTGGGAGAAGATAAAGCAGTCGCCTCATACTCGAAATCACTTGACAATGGTCTGAAGCTGGGGAAGAAGAGTGGCCTTGCAAAAGGAGTTGGGGTAGGCTTAACATACGGACTGTTGTTTTGTGCTTGGGCATTGCTTCTTTGGTATGCAGGCATACTCGTGAGACACCATAAAACAAATGGAGGGAAAGCATTCACAACTATCATTAATGTCATCTTTAGTGGATTTGCTCTCGGCCAGGCTGCTCCTAACCTTGCAGCCATTGCTAAAGGGCGAGCAGCAGCAGCCAACATCATGAATATGATTGCATCAGTTTCAAACACATCTACAAGTTTGGACAAGGGGATTGTTTTGCCACATGTGGCAGGGAAAATGGAATTTCGTGAGGTCTGCTTTTCTTACCCATCAAGATCAAACTTGGTCTTTGAAAATTTGACCTTCACAGTAACTTCTGGGAAGACTATCGCAGTTGTTGGTCCTAGTGGTTCAGGAAAGAGCACTATCATTTGTATGATTCAAAGATTTTATGATCCCACCTCAGGTAGGATACTATTGGATGGGCACGATCTTAAGAGTCTTCAGTTGAAATGGTTGAGGGAACAAATGGGTTTGGTTAGTCAAGAACCAGCGCTATTTGCCACAACAATATCTGAAAATATTTTACTTGGAAACGAGTATGCAAACATGGATCAAATCATACAAGCAGCGAAAGCTGCAAATGCCCATTCTTTCATTGAAGGCTTACCTGATGGTTATTTGACTCCGGTTGGAGAGGGGGGCACGCAACTTTCAGGGGGGCAGAAACAGAGAATTGCAATAGCAAGAGCGATGCTCAGAAACCCAAAGGTGTTACTTCTGGATGAGGCCACTAGTGCTCTTGATGCAGAATCAGAATTGATAGTTCAACAGGCTCTGGAAAAATTAATGTCAAATCGAACTACAATTATTGTTGCCCACAGATTATCCACCATTCGTGACGTTGATACAATCTTGGTGTTGAAGAACGGTCAGGTTGTAGAAAGCGGGACTCATTCACAATTGATGTCAAAAAAAGGAGACTACATGCATTTAGTGAACTTGCAAGCCTCAGACAACCCCATGACAAGTTCAAGTGCAATATCTCGATCTGGAAGTTCAAGACATTCAAGTTTTCGAGAAGTTTCAGACAACCAAAAATATCCAGATGAGTTGAAGTCCATTTCAACAAGAGAGCCTCAACCTGGTGACCAAAAGTCCATTCCATCAATCTTGGACCTGCTAAAACTAAATGCTCCTGAATGGCCTTATGCAATACTTGGATCAGTGGGTGCAATTATGGCAGGCATGGAAGCTCCTCTCTTTGCTCTTGGTATTACTCATATTTTGACTGCGTTCTACTCCCCACATGGTTCTAAAATCAAGCAAGAGGTTGATCGGGTGGCTCTGATATTCGTTGGAGTTGCTGCTGTGACTATACCTATTTACCTGTTACAACATTACTTTTTTACATTGATGGGAGAGCGTCTCACAGCCCGTGTACGGTTATTAATGTTTTCAGCTATCCTAACCAATGAAATAGCATGGTTCGACTTGGACGAGAACAACACGGGATCATTAACAGCTATGCTAGCCGCAGATGCAACATTAGTAAGAAGTGCTTTGGCTGACAGACTCTCTACCATTGTACAAAATGTAGCTCTCACTGTGACAGCATTTGTTATTGCCTTCACATTGAGTTGGAGACTAACAGCTGTGGTTGTATCTTGCCTGCCTCTTCTTATTGGGGCGTCTATCACTGAACAACTATTTCTCAAGGGGTTCGGGGGAGATTACAGTGCTTCCTACTCTAGAGCAACTTCTTTGGCACGTGAAGCTATCTCCAATATACGAACTGTTGCTGCTTTTGGTGCAGAAGATCGAATCTCATTCCAATTTTCCTCTGAATTGAACAAACCTAACAGGCAAGCACTTTTGCGAGGCCACATCTCAGGCTTTGGTTATGGTGTGACGCAATTGTTTGCTTTTTGCTCTTATGCACTTGGCCTCTGGTATGCATCCATCTTGATCAAGCATAAAGAGTCTAACTTTGGAGACATTATGAAGTCTTTTATGGTTTTGATCATCACGGCTCTGGCAATAGCAGAAACACTAGCTCTTACCCCGGACATTGTCAAAGGATCACAAGTTCTGGGGTCAGTTTTTGGAATTCTCCGAAGGAGAACATCCATCCCTCCCAATGAACCTAACTCAAAGGTGATGACTGATATGAAAGGAGAGATAGAGCTTAAAAATGTACACTTTAGCTATCCAATGAGACCTAACATCACCATTTTTGAAAACTTAAACCTAAAAATCAGAGCAGGAAAGAGTCTTGCGGTAGTTGGGCAGAGTGGCTCTGGGAAGAGTACTGTGATCTCTCTGGTCATGAGATTTTACGACCCAACTTATGGAAAGGTCTTAATTGATGGATGTGATATCAAAAGCCTCAACTTGAGATCCATAAGGCTGAGAATAGGTCTAGTTCAACAAGAACCTGCTTTATTCTCCTCCACGGTATATGAAAACATCAAGTATGGAAAAGAAGAGGCCTCAGAAGTTGAAATAATGAAGGCCGCGAAAGCAGCAAATGCTCATGAGTTCATCGTCAGAATGCCAAAAGGGTATCAAACAGAGGTAGGTGAGAGAGGAGTGCAATTATCAGGAGGCCAGAAACAGAGGGTGGCAATTGCTCGAGCTATTCTAAAAGACCCATCTATTCTCTTATTAGATGAAGCAACAAGTGCATTAGACACAGTTTCAGAGAGATTCGTCCAAGAGGCTCTAGAGAAGCTTATGGAAGGACGAACAACCATCTTGGTAGCACACAGGTTATCAACAGTCCGAAATGCACACAACATTGCTGTGTTACAAAATGGCAAAGTGGCTGAAATGGGCAGCCATGAGAGTCTGATTGCTCAACCTGAAAGCATTTATAAGCAGTTGGTCCGTCTTCAACAAGATAATAGTGACCAAGTACTGAATTGA 3729 0.4264 MEEVELASHLQSEQNQQSKASKPEGVSFFGLFAAADTIDCVLMFLGSLGAFVHGSALPVFFILFGRMIDSLGHLSKHPHKLSSRISENALYLVYLGMVVLASAWMGVAFWMQTGERQTARLRFKYLQSVLKKDINFFDNEARDANIIFHISSDAILVQDAIGDKTGHAIRYLSQFVVGFAIGFASVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYAEAGKVAEEVISQVRTVYSFVGEDKAVASYSKSLDNGLKLGKKSGLAKGVGVGLTYGLLFCAWALLLWYAGILVRHHKTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGRAAAANIMNMIASVSNTSTSLDKGIVLPHVAGKMEFREVCFSYPSRSNLVFENLTFTVTSGKTIAVVGPSGSGKSTIICMIQRFYDPTSGRILLDGHDLKSLQLKWLREQMGLVSQEPALFATTISENILLGNEYANMDQIIQAAKAANAHSFIEGLPDGYLTPVGEGGTQLSGGQKQRIAIARAMLRNPKVLLLDEATSALDAESELIVQQALEKLMSNRTTIIVAHRLSTIRDVDTILVLKNGQVVESGTHSQLMSKKGDYMHLVNLQASDNPMTSSSAISRSGSSRHSSFREVSDNQKYPDELKSISTREPQPGDQKSIPSILDLLKLNAPEWPYAILGSVGAIMAGMEAPLFALGITHILTAFYSPHGSKIKQEVDRVALIFVGVAAVTIPIYLLQHYFFTLMGERLTARVRLLMFSAILTNEIAWFDLDENNTGSLTAMLAADATLVRSALADRLSTIVQNVALTVTAFVIAFTLSWRLTAVVVSCLPLLIGASITEQLFLKGFGGDYSASYSRATSLAREAISNIRTVAAFGAEDRISFQFSSELNKPNRQALLRGHISGFGYGVTQLFAFCSYALGLWYASILIKHKESNFGDIMKSFMVLIITALAIAETLALTPDIVKGSQVLGSVFGILRRRTSIPPNEPNSKVMTDMKGEIELKNVHFSYPMRPNITIFENLNLKIRAGKSLAVVGQSGSGKSTVISLVMRFYDPTYGKVLIDGCDIKSLNLRSIRLRIGLVQQEPALFSSTVYENIKYGKEEASEVEIMKAAKAANAHEFIVRMPKGYQTEVGERGVQLSGGQKQRVAIARAILKDPSILLLDEATSALDTVSERFVQEALEKLMEGRTTILVAHRLSTVRNAHNIAVLQNGKVAEMGSHESLIAQPESIYKQLVRLQQDNSDQVLN 1242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0736 1242 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 603 IPR027417 -
Prci8g0736 1242 Pfam ABC transporter 1014 1162 IPR003439 GO:0005524
Prci8g0736 1242 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 44 332 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci8g0736 1242 SUPERFAMILY ABC transporter transmembrane region 39 340 IPR036640 GO:0005524|GO:0016020
Prci8g0736 1242 CDD ABC_MTABC3_MDL1_MDL2 368 603 - -
Prci8g0736 1242 Gene3D - 357 604 IPR027417 -
Prci8g0736 1242 MobiDBLite consensus disorder prediction 607 633 - -
Prci8g0736 1242 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 984 1233 IPR027417 -
Prci8g0736 1242 CDD ABC_MTABC3_MDL1_MDL2 995 1233 - -
Prci8g0736 1242 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 367 602 IPR003439 GO:0005524
Prci8g0736 1242 CDD ABC_6TM_Pgp_ABCB1_D1_like 43 327 - -
Prci8g0736 1242 Pfam ABC transporter transmembrane region 44 316 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci8g0736 1242 Pfam ABC transporter transmembrane region 674 946 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci8g0736 1242 SUPERFAMILY ABC transporter transmembrane region 660 973 IPR036640 GO:0005524|GO:0016020
Prci8g0736 1242 ProSitePatterns ABC transporters family signature. 505 519 IPR017871 GO:0005524|GO:0016887
Prci8g0736 1242 SMART AAA_5 393 579 IPR003593 GO:0016887
Prci8g0736 1242 SMART AAA_5 1022 1208 IPR003593 GO:0016887
Prci8g0736 1242 FunFam ABC transporter B family member 4 985 1239 - -
Prci8g0736 1242 FunFam ABC transporter B family member 4 357 610 - -
Prci8g0736 1242 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 995 1231 IPR003439 GO:0005524
Prci8g0736 1242 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 673 960 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci8g0736 1242 ProSitePatterns ABC transporters family signature. 1134 1148 IPR017871 GO:0005524|GO:0016887
Prci8g0736 1242 MobiDBLite consensus disorder prediction 607 626 - -
Prci8g0736 1242 CDD ABC_6TM_Pgp_ABCB1_D2_like 662 978 - -
Prci8g0736 1242 Gene3D - 985 1241 IPR027417 -
Prci8g0736 1242 Gene3D ABC transporter type 1, transmembrane domain 30 962 IPR036640 GO:0005524|GO:0016020
Prci8g0736 1242 Pfam ABC transporter 385 533 IPR003439 GO:0005524
Prci8g0736 1242 PANTHER ABC TRANSPORTER B FAMILY 11 726 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0736 Prci-Chr8 4716179 4722479 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0736 16 1241 Calmodulin-binding Proteins AT2G36910 49.482 0.0 1229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0736 K05658 - gmx:100787093 1979.14