Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0730 ATGGAGGCTTTCGTGAAGGCGCCGCCGTGTCGTTGTTCAAGTTTGGCAGTCGGAATGATGGCAGTGATCTTATTATTATTAGGAGGATGGTGCAGGGAAGCCAAGGGTCGGGTGAAACTGCCGCCAAATTTGATAATTCCGGCAGTGTTCGTGTTAGGAGACTCCATCATGGACACCGGCAACAACAACGACCTGGTCTCGCTGGCTAAGTGCAATTATCCTCCTTATGGTAGAGACTTCAAAGGAGGCGTCTCCACCGGCCGCTGTTGCAACGGAAAAGTTCCTTCTGATTTGATAGTTGAGGAACTGGGAATTAAGGAGCTGTTGCCGCCGTATAAGAATCGAAATCTCAAGCCTCAAGATCTGCTCACCGGAGTCAACTTTGCCTCCGCCGCCGCCGGATATGATCCTGTCACTTCCCGAACAGCAAGAGCGACAGCAATGACGGATCAAGTAAAAGAGTTCAAGGATTACACGGAGAAGATAAGAGGGATGGTTGGAGAGGAACGAACAAAGTTCATATTGGAGAACGGTTTGGTTCTGGTGGTGGCGGGCAGCGACGATATAGCCAACACATGTTATGGTGCTAGCACCAGGCAACTCCAGTACGATGTTCCCGCTTACACTGACTTGATGGTCAACGCTGCCTCCGACATCGTCAAGGGATTGTATGAGGAGGTGGGGTCAAGAAGAATAGGAGTATTCGGGGCGGCTCCGATTGGGTGTGTGCCGTCACAGAGAACCCTAGGCGGAGGAATTCAGAGAGAATGTTCAGAAAAGGAAAACGAAGCAGCCAAGTTATTTAACTGCAAGCTGGAAAAGCGCTTGGAGGAGCTGGAACACCGTCTTCCCAATAGCACTCTCCGTTACGTTGATATTTACAACCCTCTACTTGATGTCATCATCAACTACAAAAAATATGGTTATAAAGTGCCGGACCGGGGATGCTGCGGGACGGGCATAATAGAGGCGGCGATTCTGTGCAACCGATACACTCCAACTTGTCCAGACATTCAAAATTATATATTTTGGGACACTTACCATCCCACCGAAGCAACCTACAGAAAGCTCATTCCTCCCCTTCTTCAAAAATACGCCGATGACTACTCCCGCGAACAACATGATGCGGCTCATTGTATCCCGCGCACTGTAGAATTCCATGGCAGGCGTGGTGGATCAGATACGCATCTTTGTAATGTACAGTGCCATGATTGA 1215 0.4938 MEAFVKAPPCRCSSLAVGMMAVILLLLGGWCREAKGRVKLPPNLIIPAVFVLGDSIMDTGNNNDLVSLAKCNYPPYGRDFKGGVSTGRCCNGKVPSDLIVEELGIKELLPPYKNRNLKPQDLLTGVNFASAAAGYDPVTSRTARATAMTDQVKEFKDYTEKIRGMVGEERTKFILENGLVLVVAGSDDIANTCYGASTRQLQYDVPAYTDLMVNAASDIVKGLYEEVGSRRIGVFGAAPIGCVPSQRTLGGGIQRECSEKENEAAKLFNCKLEKRLEELEHRLPNSTLRYVDIYNPLLDVIINYKKYGYKVPDRGCCGTGIIEAAILCNRYTPTCPDIQNYIFWDTYHPTEATYRKLIPPLLQKYADDYSREQHDAAHCIPRTVEFHGRRGGSDTHLCNVQCHD 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0730 404 CDD SGNH_plant_lipase_like 47 355 IPR035669 -
Prci8g0730 404 FunFam GDSL esterase/lipase APG 38 366 - -
Prci8g0730 404 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 49 60 IPR008265 GO:0006629|GO:0016298
Prci8g0730 404 Gene3D SGNH hydrolase 44 364 IPR036514 -
Prci8g0730 404 Pfam GDSL-like Lipase/Acylhydrolase 49 357 IPR001087 GO:0016788
Prci8g0730 404 PANTHER GDSL ESTERASE/LIPASE EXL3 26 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0730 Prci-Chr8 4686280 4690079 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0730 46 363 Pollen Coat Proteome AT1G75910 39.252 7.75e-72 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0730 - - pcin:129318529 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0079 2 658664 660778 Prci8g0730 8 4686280 4690079 CCT
Prci8g0730 8 4686280 4690079 Prci8g0730 8 4686280 4690079 ECH