Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0727 ATGGATGCAGTACGTGGCAGGGAGAGAGTGTCGGAGGTTGTTGGGGCGGTGATAGTGCTGTTAATATCGGTGCTATGGGGGAGAACGGAGGGGCTGGTGAGGCTGTCGGAAAATGTGACGGTGCCGGCGGTGTTGGTGCTCGGAGATTCGATAGTGGACACAGGGAACAACAACTACAACCCCGCCACCCTGGCTCGGTGCAATTACAGGCCTTATGGCAAAGACTTCCAAGGAGGCATCCCCACCGGCCGATTCGGCAACGGAAAGGTTCCCTCCGATCTTATTGTGGAAGAATTGGGAATCAAGGAACTGCTGCCAGCATATTTGGATCCAAATCTCCAACCTCAGGATCTCCCCACTGGCGTCTGCTTTGCATCGGGTGGCTCCGGATACGATCCTTTGACCTCCAAATTAGCATCAGCAATATCGCTGACTGATCAAGTGGAGCTGCTCCGACATTACAAGGAGAAGCTGAAATCACTGGTCGGAGAAGACAGAACCGATTTCATCTTATCGAACAGCATCGTTTTCGTGGTCGCAGGCAGCAATGATATCTCCAACACTTACTTTCTGACCCATGCAAGACAAGTCCAATACGATGTTCCTGCTTACGCCGACCTCATGGTCACTTCTGCTTCTAACTTAGTAAAGGAATTATACGAAGCCGGGGTGAGAAGAATCGGAGTGTTGAGTGCACCGCCAATAGGGTGTGTTCCATCTCAGAGAACATTAGTTGGAGGAATAGAAAGAGGGTGTGCAGAGATATACAACGAAGCCGCCAAGTTATTTAACTCAAAACTCTCAGAAGAGCTTGCATCTCTTAATCGCGATTTGCCCAGTAGCAGAATTGTTTACATTGATGTTTACAACCCTATCCTTGATGTCATCGTCAACTACCAGAAATACGGGTTCGAAGTCGGGGACAGAGGATGCTGCGGCACGGGCGAGATAGAGGTTGCAGAGTTATGCAATCATCTTCAACAGACGTGCGCCGATGATTCAGAATACGTGTTTTGGGATAGTTTTCATCCAACTGAGGCTGCTTACCGAAAGCTAATCAGTCCCATCCTTAGCAATATGTCTACCAATTTTCCTGACCCCAACTTCTCAGGATAA 1116 0.491 MDAVRGRERVSEVVGAVIVLLISVLWGRTEGLVRLSENVTVPAVLVLGDSIVDTGNNNYNPATLARCNYRPYGKDFQGGIPTGRFGNGKVPSDLIVEELGIKELLPAYLDPNLQPQDLPTGVCFASGGSGYDPLTSKLASAISLTDQVELLRHYKEKLKSLVGEDRTDFILSNSIVFVVAGSNDISNTYFLTHARQVQYDVPAYADLMVTSASNLVKELYEAGVRRIGVLSAPPIGCVPSQRTLVGGIERGCAEIYNEAAKLFNSKLSEELASLNRDLPSSRIVYIDVYNPILDVIVNYQKYGFEVGDRGCCGTGEIEVAELCNHLQQTCADDSEYVFWDSFHPTEAAYRKLISPILSNMSTNFPDPNFSG 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0727 371 CDD SGNH_plant_lipase_like 42 359 IPR035669 -
Prci8g0727 371 Pfam GDSL-like Lipase/Acylhydrolase 44 354 IPR001087 GO:0016788
Prci8g0727 371 PANTHER GDSL ESTERASE/LIPASE EXL3 24 354 - -
Prci8g0727 371 SUPERFAMILY SGNH hydrolase 171 358 - -
Prci8g0727 371 Gene3D SGNH hydrolase 32 363 IPR036514 -
Prci8g0727 371 FunFam GDSL esterase/lipase APG 33 361 - -
Prci8g0727 371 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 44 55 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0727 Prci-Chr8 4666469 4670664 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0727 38 360 Pollen Coat Proteome AT1G75910 39.571 9.99e-78 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0727 - - gmx:100793604 526.554