Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0671 ATGGTTGCGGGAATGGATTTTTCTCCGCCGTTTACCATAATAGAAGGCACTCAAGGTAGTTACAACAAAGACAATGCATCCATCATGGAAGAAGAGAAATCAAGAGATTTGAACAAAGTGAAACAAACTACAATTGGTAAACCCCCGCGGAACCTCTCCCTCTTGAGACATAGCATCAGCTCCAACAGGTTGCAAACTGCTGCAGATTTGAGTTCTGATGCAGGGGTTGTTGGGAGTAAATCATCTTCTGACGAGAAGGCAGAGTTTCAACCCATATATCGGTCAGGAAGTTGCGCTGAAATTGGTCCTAAACAGTGCATGGAAGATGAACACATCTGTGTTGATAATCTTATTGAGCAACTAGATTCAGTTTCAGAAATTCCTTCTCATGGGGCTTTCTATGGGGTGTTTGATGGTCATGGTGGGACTGATGCAGCTACGTATATAAGAAATAACATCCTCAGATTTATAGTTGAGGATCCTCATTTTCCAACTTACCTAGAGAAGGCAATTAAAAGCGCCTTTCTGAAAGCTGATTATGCATTTGCGGATGCTAGTTCGCTTGATATCTCCTCTGGCACCACTGCTTTAACTGCAATTGTATTTGGAAGGAGCCTGATAGTTGCGAATGCGGGGGATTGCCGAGCCGTGCTGGGGAGGCGAGGGAGGGCAATAGAGATGTCAAAAGACCACAAACCAGATAGCAGCTCAGAAAGGATAAGGATTGAGAAACTTGGTGGAGTGGTATATGATGGATACCTGAATGGTCAGCTATCTGTTGCGCGTGCGTTAGGAGACTGGCACATGAAAGGTCCCAAGGGTTCTGCTTGCCCTTTAAGTGCCGAACCAGAGTTGCAGGAAATCCTCTTGACTGAGGACGATGAGTTCTTGATTATGGGATGCGACGGCCTCTGGGATGTTATGAGCAATCAATGTGCTGTGACCATGGCGAGGAGAGAGTTGATGTTGCATAATGATCCCGAAAGGTGTTCGAAAGAGCTTGTGAGAGAGGCTCTTAAGCGTGACACTTGTGATAATTTAACTGTCATAGTGGTGTGTTTCTCCCCAGATCCTCCTCCTCGGATAGAGGCTCCTCCATCTCGAGTTAGGAGGAGTATTTCAGCGGAAGGGCTCAATTTACTCAAGGGTGTACTAGATTGTACTTCATGA 1170 0.4556 MVAGMDFSPPFTIIEGTQGSYNKDNASIMEEEKSRDLNKVKQTTIGKPPRNLSLLRHSISSNRLQTAADLSSDAGVVGSKSSSDEKAEFQPIYRSGSCAEIGPKQCMEDEHICVDNLIEQLDSVSEIPSHGAFYGVFDGHGGTDAATYIRNNILRFIVEDPHFPTYLEKAIKSAFLKADYAFADASSLDISSGTTALTAIVFGRSLIVANAGDCRAVLGRRGRAIEMSKDHKPDSSSERIRIEKLGGVVYDGYLNGQLSVARALGDWHMKGPKGSACPLSAEPELQEILLTEDDEFLIMGCDGLWDVMSNQCAVTMARRELMLHNDPERCSKELVREALKRDTCDNLTVIVVCFSPDPPPRIEAPPSRVRRSISAEGLNLLKGVLDCTS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0671 389 FunFam Probable protein phosphatase 2C 22 79 357 - -
Prci8g0671 389 ProSiteProfiles PPM-type phosphatase domain profile. 94 354 IPR001932 -
Prci8g0671 389 PANTHER PROTEIN PHOSPHATASE 2C 77 352 IPR015655 GO:0004722|GO:0006470
Prci8g0671 389 ProSitePatterns PPM-type phosphatase domain signature. 133 141 IPR000222 GO:0043169
Prci8g0671 389 SMART PP2C_4 84 352 IPR001932 -
Prci8g0671 389 SMART PP2C_SIG_2 109 354 IPR001932 -
Prci8g0671 389 Pfam Protein phosphatase 2C 96 346 IPR001932 -
Prci8g0671 389 Gene3D - 76 357 IPR036457 -
Prci8g0671 389 CDD PP2Cc 93 354 IPR001932 -
Prci8g0671 389 SUPERFAMILY PP2C-like 89 355 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0671 Prci-Chr8 4351163 4353814 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0671 5 386 PP2C-type Phosphatase Gene Family AT2G33700 71.875 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0671 K14803 - cave:132190044 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0671 8 4351163 4353814 Prci8g0671 8 4351163 4353814 ECH