Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0669 ATGAATTTGCTTTGGGCTGTTTCTTGGGTGCTTGTGCTTTTCACAGTACCTCCATGTGTGGTCAGTGCTAATTCATCAAGACCGGTTGTCGTGCATATTGGGGCTATCTTCAACTTTGATTCTACTATTGGGAGGGTAGCCAAAATCGCGTTGGAGGAAGCAGTGCAGGATATAAATGCTAATGCTAGCATACTCCGTGGAACTAAACTCGTCCTCACTGAGCAAAATTCCAATTGCAGTGGTTTCTTGGGCTTGGTTCAAGCTTTGCGGTTCATGGAGACTGATGTGGTGGCAATAATAGGCCCACAATCTTCCGTTGTTGCTCACATAATATCCCATGTGGCAAATGAGCTTCATGTCCCTCTCTTGTCATTTGCTGCAACGGACCCAACTCTATCCAACCTGCAGTTCCCATTTCTTGTGAGAACAACGATGAGTGATTTGTACCAAATGGCTGCAATTGCTGAAATTGTTGATTATTATGGTTGGAGGGAGGTCATTGCTATATTTATAGATGATGATTTTGGACGAAATGGCGTGTCAGCCTTAGATGGTCAACTCGCAGCTAGGCGCTGTAGAATCTCTTACAAGGCAGGAATTAAATCAGGACCTGGAGTTGGTCGGAGTGAAATCACGGATTTGCTGGTCAAGGTGGCTCTAATGCAATCTCGGGTCATTGTTCTCCATGTAAATCCTGATTCAGGATTTATGGTTTTCAATGTTGCCAAGTATCTTGGGATGACAGGGAATGGCTACGTCTGGATAGCCACAGACTGGCTCTCCTCTGTTCTGGATTCTGCTTCTCTCCCTTTAGACACAATGAATGTTCTTCAGGGCGTTCTTGTTTTACGCCAACATACTCCTGATTCAGATAGAAAAAAGGCATTTCTGGCTAGGTGGAACAAGTTAACTGGAGGCTCTATGGGTTTACATTCTTATGCCCTTCATGCGTATGATACTGTTTGGCTGCTTGCACATGCTATGGATGCATTCTTCAACCAGGGTGGGATTATATCATTTTCTAACGACTCCAGGATAGATGATGTTGACGTAGGTAATCTTAACCTTAAGGCAATGAGCGTTTTTGACAATGGAACGCTTCTGCTGAACAACATATTGCAGAGCAACTTTGTTGGTTTAACAGGTCCCGTAAAATTTGGGTCAGACAGATCTCTTGTTCGTCCTGCATATGATGTTATCAATGTGGTGGGAACTGGGATTCGTCAGGTTGGTTACTGGTCCAACTATTCTGGTCTGTCCATTGTACCTCCTGAGACATTGTATGCTAAGCCTCCTAATCGCTCAAGTGCAAACCAACAACTCCACTCCGTACTATGGCCTGGAGAAACACTATCAAAACCCCGTGGATGGGTTTTTCCAAATAATGGAAAACAACTGAGAATTGGCGTGCCAGTCCGATTCAGTTACCGTGAATTTGTATCACCCGTTCAAGGAACTGATATGTTTAAAGGTTTCTGCATTGATATATTCACAGCAGCTGCAGGCTTGTTACCGTATGCTGTTCCATATCGCTTTGTCCCATTTGGAGATGGCCATAAAAACCCAAACTACGATGAACTTGTTAGGTTGATCACCACAGGGTACTTTGATGGTGCTGTTGGTGACATTGCCATTGTCACAAACCGGACAAAGGCTGTAGATTTTACACAGCCATATATTGAATCTGGACTTGTCGTGGTGGCACCTTTTAAGAAAACAAACTCTGGTGGATGGTCTTTTCTGCGGCCATTTACTCCTTTAATGTGGATTGTCACTGCTTCTTTCTTCTTTTTCATTGGGATAGTTGTATGGATTCTGGAGCATAGAATAAATGACGAGTTCAGGGGTCCACCTAGACAGCAAATTATCACAATTTTATGGTTTAGCTTGTCAACTCTTTTCTTTGCCCACAGAGAGAATACTATGAGTACTCTTGGTCGCATGGTGGTAATCATCTGGCTGTTTGTGGTTTTGATAATCAATTCCAGCTACACAGCGAGTTTGACATCAATCCTCACAGTGCAGCAACTATCTTCTCATATCAACGGAATAGATAGCTTAAAAGCTGGTGATGAACCTATTGGGTATCAAGTGGGTTCATTCGCAGAACATTATTTGGCTGATGATATTGGAATATCCAAATCCAGGCTTGTTGCCCTTGGATCTCCTGAAGAATATGCCAAGGCTCTCCAACTTGGTCCTGACAAAGGAGGTGTTGCTGCTATTGTTGACGAACGACCCTATGTTGAAATTTTCTTATCAACCCAATGCAGCTTCAGGATAGTAGGTCAGGAGTTCACCAGAAGTGGCTGGGGATTTGCATTCCCACGGGACTCCCCTCTGGCCGTTGACTTGTCAACTGCAATTCTACAACTTTCTGAAAATGGTGAACTGCAGCGGATTTATGATAAGTGGCTCGTAGGAAGAGGCTGCAGCGCAGAAGATACTGAAATTGATTCAGATCGGCTTCGGTTTAAAAGCTTCTGGGGTCTCTTTCTTATATGTGGGATTGCATGCGTTGTTGCTCTTTGTATCTATTTTTTGCAGATTATGCTTCAGTTACGCCATTCCACTCCTGCCCAACCGGCTGCTTCCAATGGAAGCTCAATTTCTGGACATCTGCGAAGATTTATTTCACTGATTGACGAGAAGGAAGAACGATCCAATAACAGCAGTGGAAAGAGGGGTGAAGCCCAAAGATCATCAGAAGAAGATGAACTAGGGAGGCAGCTCAAGAGGTTACAAACACACAGAAGTCAGACAACTGCTCAACTCAATATTTGA 2784 0.4375 MNLLWAVSWVLVLFTVPPCVVSANSSRPVVVHIGAIFNFDSTIGRVAKIALEEAVQDINANASILRGTKLVLTEQNSNCSGFLGLVQALRFMETDVVAIIGPQSSVVAHIISHVANELHVPLLSFAATDPTLSNLQFPFLVRTTMSDLYQMAAIAEIVDYYGWREVIAIFIDDDFGRNGVSALDGQLAARRCRISYKAGIKSGPGVGRSEITDLLVKVALMQSRVIVLHVNPDSGFMVFNVAKYLGMTGNGYVWIATDWLSSVLDSASLPLDTMNVLQGVLVLRQHTPDSDRKKAFLARWNKLTGGSMGLHSYALHAYDTVWLLAHAMDAFFNQGGIISFSNDSRIDDVDVGNLNLKAMSVFDNGTLLLNNILQSNFVGLTGPVKFGSDRSLVRPAYDVINVVGTGIRQVGYWSNYSGLSIVPPETLYAKPPNRSSANQQLHSVLWPGETLSKPRGWVFPNNGKQLRIGVPVRFSYREFVSPVQGTDMFKGFCIDIFTAAAGLLPYAVPYRFVPFGDGHKNPNYDELVRLITTGYFDGAVGDIAIVTNRTKAVDFTQPYIESGLVVVAPFKKTNSGGWSFLRPFTPLMWIVTASFFFFIGIVVWILEHRINDEFRGPPRQQIITILWFSLSTLFFAHRENTMSTLGRMVVIIWLFVVLIINSSYTASLTSILTVQQLSSHINGIDSLKAGDEPIGYQVGSFAEHYLADDIGISKSRLVALGSPEEYAKALQLGPDKGGVAAIVDERPYVEIFLSTQCSFRIVGQEFTRSGWGFAFPRDSPLAVDLSTAILQLSENGELQRIYDKWLVGRGCSAEDTEIDSDRLRFKSFWGLFLICGIACVVALCIYFLQIMLQLRHSTPAQPAASNGSSISGHLRRFISLIDEKEERSNNSSGKRGEAQRSSEEDELGRQLKRLQTHRSQTTAQLNI 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0669 927 FunFam Glutamate receptor 703 810 - -
Prci8g0669 927 PIRSF IGluLR_plant 2 926 IPR017103 -
Prci8g0669 927 Gene3D - 461 575 - -
Prci8g0669 927 MobiDBLite consensus disorder prediction 885 913 - -
Prci8g0669 927 Gene3D - 576 703 - -
Prci8g0669 927 Gene3D - 754 813 - -
Prci8g0669 927 SUPERFAMILY Periplasmic binding protein-like II 443 806 - -
Prci8g0669 927 Pfam Receptor family ligand binding region 49 404 IPR001828 -
Prci8g0669 927 Pfam Ligand-gated ion channel 807 839 IPR001320 GO:0015276|GO:0016020
Prci8g0669 927 FunFam Glutamate receptor 146 298 - -
Prci8g0669 927 CDD PBP1_GABAb_receptor_plant 32 423 IPR044440 -
Prci8g0669 927 Gene3D - 146 419 - -
Prci8g0669 927 CDD GluR_Plant 464 806 - -
Prci8g0669 927 PRINTS Metabotropic glutamate GPCR signature 131 150 IPR000337 GO:0004930|GO:0007186|GO:0016020
Prci8g0669 927 PRINTS Metabotropic glutamate GPCR signature 150 166 IPR000337 GO:0004930|GO:0007186|GO:0016020
Prci8g0669 927 PRINTS Metabotropic glutamate GPCR signature 166 183 IPR000337 GO:0004930|GO:0007186|GO:0016020
Prci8g0669 927 PRINTS Metabotropic glutamate GPCR signature 99 125 IPR000337 GO:0004930|GO:0007186|GO:0016020
Prci8g0669 927 FunFam Glutamate receptor 577 707 - -
Prci8g0669 927 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 44 60 - -
Prci8g0669 927 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 317 329 - -
Prci8g0669 927 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 104 132 - -
Prci8g0669 927 FunFam Glutamate receptor 461 576 - -
Prci8g0669 927 Pfam Bacterial extracellular solute-binding proteins, family 3 486 806 IPR001638 -
Prci8g0669 927 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 31 883 IPR015683 -
Prci8g0669 927 MobiDBLite consensus disorder prediction 885 927 - -
Prci8g0669 927 SUPERFAMILY Periplasmic binding protein-like I 27 457 IPR028082 -
Prci8g0669 927 Gene3D - 49 394 - -
Prci8g0669 927 SMART GluR_14 467 808 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0669 Prci-Chr8 4342890 4347303 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0669 1 895 Ion Channels AT1G42540 64.128 0.0 1222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0669 K05387 - gmx:100777478 1429.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0669 8 4342890 4347303 Prci5g2146 5 38821484 38826814 CCT
Prci8g0669 8 4342890 4347303 Prci8g0669 8 4342890 4347303 ECH
Prci5g2146 5 38821484 38826814 Prci8g0669 8 4342890 4347303 ECH