Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0654 ATGGCATACCACCAGATCCAGGGTCACACGCCCACGCCTGGATCCAATTCAAGTTCTGGATTTCAACCAATAAGCTCCCCTTTTGGTGATACGACTTATACCAAAGTATTTGTTGGAGGATTGGCGTGGGAGACCCAGAGCGAAACCATGCGCCGATACTTTGAGCAGTTTGGCGACATTCTTGAAGCTGTTGTAATTACTGATAGGAATACAGGCCGATCCAAAGGCTATGGTTTTGTGACTTTCCGGGATCCTGAGGCTGCTAGAAGAGCCTGCGCTGATCCAACTCCTATCATTGATGGAAGGAAGGCCAATTGTAACCTGGCTTCACTTGGCCGACCATGGCCTCCTGTGCCATATGGACGGATAAGGCCAGCTGCTGCTTACATGGGAAATTTGCAACCAGCCCGAAATCCGTATGTTGGAAGTTTTGGCTATCAGCAGCCACCTTCTTACAACTATCAACAAGGATTGGTTTATCCTCATTATGGGTATCCAACATATGGACCTGAATATGTATACCCACAGGGTTTGTACAACCCATATACGGGCCAGCAATACGTTCAGATATATGGAGTGCCTGGTGCAGTGAATAATGCTATTTATCCTTATGGGCAGTTAGGTCAAGCTATTCCCAGTAGTCATGGTTATGCAGGAATGCAGGGCTATGCTGTAACTGGTCATCACATTGTGCCTTATGGTGGAACCAATGTTAATGCCCTGACTACTTCACCTATGCCTACCATTCAAGTACCATATCCCAGTGGAATTGCTGCACCAGTTCCCGGACAACCACAATTTATTGTCCCTGCGCCTTCTCAGTTTATGCAAGGTACTGGTCCTGACCAAGCAGCTGGGTGA 861 0.475 MAYHQIQGHTPTPGSNSSSGFQPISSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILEAVVITDRNTGRSKGYGFVTFRDPEAARRACADPTPIIDGRKANCNLASLGRPWPPVPYGRIRPAAAYMGNLQPARNPYVGSFGYQQPPSYNYQQGLVYPHYGYPTYGPEYVYPQGLYNPYTGQQYVQIYGVPGAVNNAIYPYGQLGQAIPSSHGYAGMQGYAVTGHHIVPYGGTNVNALTTSPMPTIQVPYPSGIAAPVPGQPQFIVPAPSQFMQGTGPDQAAG 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0654 286 SMART rrm1_1 35 107 IPR000504 GO:0003723
Prci8g0654 286 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 36 92 IPR000504 GO:0003723
Prci8g0654 286 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 34 111 IPR000504 GO:0003723
Prci8g0654 286 Gene3D - 3 116 IPR012677 -
Prci8g0654 286 PANTHER BOULE-RELATED 14 250 - -
Prci8g0654 286 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 28 114 - -
Prci8g0654 286 MobiDBLite consensus disorder prediction 8 24 - -
Prci8g0654 286 CDD RRM_RBM24_RBM38_like 34 109 - -
Prci8g0654 286 MobiDBLite consensus disorder prediction 1 24 - -
Prci8g0654 286 SUPERFAMILY RNA-binding domain, RBD 11 121 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0654 Prci-Chr8 4288949 4293192 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0654 10 110 C2H2 Transcription Factor Family AT2G19380 38.614 4.40e-16 76.3