Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0639 ATGGCCCAAACAAGCCCTTTCTTCCTCGTCATTACCATTATTCTCTGCTACCTCCTTGACCCTTCAGTCTTAGCCTCAACTGACTCCTTCCTCTACGGTGGGTGCACCCAGCAACAGTTCATTCCCAACTCACCGTACGAGTCAAACCTTGACTCGCTACTCACCTCACTCGTCAACTCAGCCACTTACTCCACCTACAACAACTTCACCATCATCGGCTCCAGCGCTCAGGACGTCGTCTACGGCGTCCACCAATGCCGCGGCGATCTGTCCATGCCCGACTGCGCCGCCTGCGTGGCCCGCGCCGTCACGCGAGCCGGCGTCCTCTGCGAGCAGCGTTGCGGCGGCGCCGTTCAGCTCGATGGCTGCTACGTCAAGTACGACAACGCCACGTTCTTAGGCGTCGAGGACAAGACGGTGGTGCTGAAGAAATGCGGACCGTCCGTCGGATACAACTCGGACGCCATGTCGAGCAGGGACGCGGTCATGTCCGGGCTGGCGGGTTCGAGCGGTCCCTTCCGGGTGGGCGGGTCGGGGAAGGTGCGGGGTGTAGCCCAGTGTACGGGGGATCTGAGCTTCGCGGAGTGCCAGGATTGCCTGGGGGAGGCGATCGGACGGCTGAGAAGCGATTGTGGGACAGCGGATTATGGGGACATGTTCTTGGCTAAGTGCTACGCTAGGTACTCCACCTACGGTGGGTCCCACGGTTACTCCAAGGCCCACGAGAAATCAAATGAAGGAGAGAAGACATTTGCAATAATCATAGGATTATTAGCAGGAGTAGCCATACTTATCATTTTCCTTGCTTTCTTGAGGAAGCTTTGTGAAGATCGCGGTAAGTAA 843 0.5753 MAQTSPFFLVITIILCYLLDPSVLASTDSFLYGGCTQQQFIPNSPYESNLDSLLTSLVNSATYSTYNNFTIIGSSAQDVVYGVHQCRGDLSMPDCAACVARAVTRAGVLCEQRCGGAVQLDGCYVKYDNATFLGVEDKTVVLKKCGPSVGYNSDAMSSRDAVMSGLAGSSGPFRVGGSGKVRGVAQCTGDLSFAECQDCLGEAIGRLRSDCGTADYGDMFLAKCYARYSTYGGSHGYSKAHEKSNEGEKTFAIIIGLLAGVAILIIFLAFLRKLCEDRGK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0639 280 Pfam Salt stress response/antifungal 35 129 IPR002902 -
Prci8g0639 280 Pfam Salt stress response/antifungal 173 231 IPR002902 -
Prci8g0639 280 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 7 275 - -
Prci8g0639 280 Gene3D - 149 232 IPR038408 -
Prci8g0639 280 Gene3D - 27 132 IPR038408 -
Prci8g0639 280 FunFam cysteine-rich repeat secretory protein 3 27 132 - -
Prci8g0639 280 FunFam Cysteine-rich repeat secretory protein 60 153 231 - -
Prci8g0639 280 ProSiteProfiles Gnk2-homologous domain profile. 28 132 IPR002902 -
Prci8g0639 280 ProSiteProfiles Gnk2-homologous domain profile. 133 233 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0639 Prci-Chr8 4184384 4186669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0639 10 240 Pollen Coat Proteome AT4G20670 25.100 9.95e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0639 - - rcu:8260267 394.045