Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0629 ATGCCTGGGAATGAGGTGAAAGCGGAGGCGGTGAGGGAGGAAGGCAAGGAGAAACGGAAGCTAATGTTGTCGTCTTCGAGATCATCTTCTTCTTCGTCGTCGTCGTCGTCAGCTTCGGATAACAGAGAGTATGAAGTGGAGGACCTGAGAGACAGGTTAAAATCGTCGCGAGGAAGCCGATTTCAATTGATTGAGAATGAGTTGAATGAGCTCAACCAGAAAAAGCTCAGTCGCCAAGTCCTTGACGGCATCCGAGGCCTCTCCAAAGATCTCGTCATTCATCCAGAGAACAGGTGGTATCGGGCATGGACAAAATTCATATTGCTGTGGGCAATTTACTCATCCTTCTTCACTCCAATGGAGTTTGGATTTTTTCGTGGGCTAGACGCGGATCTCTTTATACTGGACATAATTGGCCAAGTTGCATTTCTCGTAGACATTGTTTTGCAGTTCTTTGTTGCTTATAGAGATAGTCAGACCTACCGTATGATCTACAAGCGAACCCCTATAGCTCTGCGGTATCTGAAATCTAGCTTTATCTTTGATCTTCTTGGATGTATGCCTTGGGACATCATCTATAAGGCTAGTGGAAGAATAGAGGGGGTAAGGTATCTTTTGTGGATAAGATTATATCGGGTGCGGAAAGTGACTGAATTTTTACAGAGGCTAGAGAAGGATATACGTATTAATTACATGTTTACAAGGATTGCCAAACTTATAGTAGTTGAACTCTACTGCACCCATACAGCTGCCTGCATCTTCTACTACTTGGCCACCACACTACCACCATCCCAAGAGGGTTACACATGGATAGGAAGTTTAAAGCTGGGTGACTATAGTTATTCACATTTCAGAGACATTGATATTTGGAAGTGTTACACAACATCTTTGTATTTCGCTATTGTTACAATGGCCACTGTTGGCTATGGAGACATTCATGCAGTAAATATGAGGGAGATGATATTCATAATGATATATGTTTCATTTGATATGGTTCTTGGTGCTTATTTAATTGGTAACATGACGGCTTTAATAGTCAAAGGATCAAAGACAGAAAAGTTTAGGGATAGAATGACAGATCTTTTGAAATATATGAATAGAAACAGACTTGGAAGGGACATTCGGGAACAAATAAAAGGCCATATGCGCTTACAGTATGAAAGTAGCTACACTGAGCCAGCTGCAATTCAGGACCTCCCCATTTCAATTCGATCCAAGATATCCCAAGAATTATATTTGCCATACATTGAGAAAGTTTCTCTGTTTAAGAATTGCTCTTCAGAATTTATCAATCAGATTGTTATCAGGCTCCATGAGGAATTCTTTCTCCCAGGAGAAGTGATATTGGAACAAGGAAATGTTGTAGATCAACTATACTTTGTCTGTCATGGTGTGCTGGAGGAAGTAGGCCCCGGTGAAAATGGATCTGAAGAGACTGTTCAGCTTCTAGAGCCTAACAGTTCCTTTGGACAAATATCCATTCTATGTAACATTCCTCAGCCATATACTGTTCGGGTTTGTGAACTGTGTAGGCTTCTGCGGCTTGATAAGCAATCATTTACCGATATCCTTGATATATACTTCTATGATGGGAGGAAAGTATTAAACAACCTTCTAGAGGGAAAAGACGCTAATCGAGGCAAGCAATTGGAGTCAGATATCACATTCCATATTGGAAAGCAAGAAGCTGAACTTGCTTTGAAGGTTAATAATGCAGCTTTTAATGGGGATCTGAATCATCTTAAGGGATTGATTCGAGCTGGAGCTGATCCAAACAAGACTGATTATGATGGACGGTCACCGTTGCATCTCGCAGCATCTAGGGGATATGAAGAGATCGCCCTTTTCCTTATTCATGAAGGTGTAGAAATCGATGCTAGAGATAACTATGGGAACACACCCTTATTTGAAGCTGTAAAGAATGGACATGATCGAGTGGCTTCTTTACTAGTTGGAAAAGGGGCTTCTATGAAAATAGAGGATGCTGGCAGTGTTCTATGTAATGCTGTTGCAAGGGGAGATTCAGATCTTAAAAGGCTATTATCTAATGGCATGGATCCTAATACGAAAGATTACGATTACCGAAGCCCTCTTCATGTTGCTGCAGCAGAGGGTTTGTTCTTAATGGCTAAGTTGCTGATAGAAGCTGAAGCTAGCGTTTTTATCAAAGACAGGTGGGGAAATACCCCAATTGATGAAGCCCGGCTGTGTGGAAATAAGAATCTGATCAAGCTCCTTGAAGAAGCAAAGTCTGCTCAATTGTCAAAATTCCCTCATCTCTCCTCAGAACTTACAGATAAATTTCATCCTAAGAAATGTACAGTCTTTCCTTTCCAGCCATGGGATCCAAAAGAACATAGAAGACATGGGATTGTACTATGGGTTCCACACTCCATTGAAGAGCTTATCGAAACAGCAGCAGAGCAGCTAGATGTTTCTAGTGATTGTTGTATTCTATCAGAAGATGCTGGTAAAATTACTGATGCGGGATTGATTATGGATGGTCAAAAGCTGTATTTAGTCCACGAAACGCATTAA 2538 0.4121 MPGNEVKAEAVREEGKEKRKLMLSSSRSSSSSSSSSSASDNREYEVEDLRDRLKSSRGSRFQLIENELNELNQKKLSRQVLDGIRGLSKDLVIHPENRWYRAWTKFILLWAIYSSFFTPMEFGFFRGLDADLFILDIIGQVAFLVDIVLQFFVAYRDSQTYRMIYKRTPIALRYLKSSFIFDLLGCMPWDIIYKASGRIEGVRYLLWIRLYRVRKVTEFLQRLEKDIRINYMFTRIAKLIVVELYCTHTAACIFYYLATTLPPSQEGYTWIGSLKLGDYSYSHFRDIDIWKCYTTSLYFAIVTMATVGYGDIHAVNMREMIFIMIYVSFDMVLGAYLIGNMTALIVKGSKTEKFRDRMTDLLKYMNRNRLGRDIREQIKGHMRLQYESSYTEPAAIQDLPISIRSKISQELYLPYIEKVSLFKNCSSEFINQIVIRLHEEFFLPGEVILEQGNVVDQLYFVCHGVLEEVGPGENGSEETVQLLEPNSSFGQISILCNIPQPYTVRVCELCRLLRLDKQSFTDILDIYFYDGRKVLNNLLEGKDANRGKQLESDITFHIGKQEAELALKVNNAAFNGDLNHLKGLIRAGADPNKTDYDGRSPLHLAASRGYEEIALFLIHEGVEIDARDNYGNTPLFEAVKNGHDRVASLLVGKGASMKIEDAGSVLCNAVARGDSDXLKRLLSNGMDPNTKDYDYRSPLHVAAAEGLFLMAKLLIEAEASVFIKDRWGNTPIDEARLCGNKNLIKLLEEAKSAQLSKFPHLSSELTDKFHPKKCTVFPFQPWDPKEHRRHGIVLWVPHSIEELIETAAEQLDVSSDCCILSEDAGKITDAGLIMDGQKLYLVHETH 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0629 846 SUPERFAMILY cAMP-binding domain-like 349 538 IPR018490 -
Prci8g0629 846 Pfam Ankyrin repeats (3 copies) 571 661 IPR002110 GO:0005515
Prci8g0629 846 Pfam Ankyrin repeats (3 copies) 666 748 IPR002110 GO:0005515
Prci8g0629 846 ProSiteProfiles cAMP/cGMP binding motif profile. 421 541 IPR000595 -
Prci8g0629 846 ProSiteProfiles KHA domain profile. 773 846 IPR021789 -
Prci8g0629 846 SUPERFAMILY Ankyrin repeat 570 749 IPR036770 -
Prci8g0629 846 Gene3D - 554 662 IPR036770 -
Prci8g0629 846 PANTHER POTASSIUM CHANNEL AKT1 69 843 IPR045319 GO:0005249|GO:0006813
Prci8g0629 846 Pfam KHA, dimerisation domain of potassium ion channel 772 841 IPR021789 -
Prci8g0629 846 Gene3D Jelly Rolls 409 527 IPR014710 -
Prci8g0629 846 MobiDBLite consensus disorder prediction 7 23 - -
Prci8g0629 846 SUPERFAMILY Voltage-gated potassium channels 95 346 - -
Prci8g0629 846 Gene3D Helix hairpin bin 349 408 - -
Prci8g0629 846 SMART ANK_2a 597 626 IPR002110 GO:0005515
Prci8g0629 846 SMART ANK_2a 630 659 IPR002110 GO:0005515
Prci8g0629 846 SMART ANK_2a 661 690 IPR002110 GO:0005515
Prci8g0629 846 SMART ANK_2a 694 723 IPR002110 GO:0005515
Prci8g0629 846 SMART ANK_2a 727 757 IPR002110 GO:0005515
Prci8g0629 846 SMART ANK_2a 558 593 IPR002110 GO:0005515
Prci8g0629 846 FunFam Potassium channel SKOR 101 346 - -
Prci8g0629 846 ProSiteProfiles Ankyrin repeat profile. 694 726 IPR002110 GO:0005515
Prci8g0629 846 ProSiteProfiles Ankyrin repeat region circular profile. 597 629 - -
Prci8g0629 846 ProSiteProfiles Ankyrin repeat region circular profile. 630 661 - -
Prci8g0629 846 Gene3D - 663 757 IPR036770 -
Prci8g0629 846 Pfam Cyclic nucleotide-binding domain 441 525 IPR000595 -
Prci8g0629 846 SMART cnmp_10 421 539 IPR000595 -
Prci8g0629 846 FunFam Potassium channel KAT2 409 546 - -
Prci8g0629 846 PRINTS EAG/ELK/ERG potassium channel family signature 245 255 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci8g0629 846 PRINTS EAG/ELK/ERG potassium channel family signature 337 346 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci8g0629 846 PRINTS EAG/ELK/ERG potassium channel family signature 136 146 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci8g0629 846 PRINTS EAG/ELK/ERG potassium channel family signature 293 310 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci8g0629 846 ProSiteProfiles Ankyrin repeat profile. 661 693 IPR002110 GO:0005515
Prci8g0629 846 ProSiteProfiles Ankyrin repeat profile. 597 629 IPR002110 GO:0005515
Prci8g0629 846 PRINTS Ankyrin repeat signature 677 691 IPR002110 GO:0005515
Prci8g0629 846 PRINTS Ankyrin repeat signature 598 613 IPR002110 GO:0005515
Prci8g0629 846 Pfam Ion transport protein 101 346 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci8g0629 846 ProSiteProfiles Ankyrin repeat profile. 630 662 IPR002110 GO:0005515
Prci8g0629 846 MobiDBLite consensus disorder prediction 1 45 - -
Prci8g0629 846 CDD CAP_ED 421 535 IPR000595 -
Prci8g0629 846 MobiDBLite consensus disorder prediction 24 40 - -
Prci8g0629 846 Gene3D - 103 347 - -
Prci8g0629 846 ProSiteProfiles Ankyrin repeat region circular profile. 694 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0629 Prci-Chr8 4117661 4126877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0629 668 747 Ion Channels AT5G37500 34.314 4.97e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0629 K21867 - gmx:100814385 1400.19