Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0628 ATGTCCTTCTCTCTCCTCGAAGCGTGTAGGAAGAGAAAGAGATGGCCCAAGGTTTTCAGGTTTCACTCTTTCGCCGACCCTGGTTGCCCCATCAATCCGAACGGACCTTTCAGAGATAACATTCGTCTTTTCCTTCAAGAATGTGGAGAGCTTGAAGACTTCGAGATCCAGGGCATGCCTTTATGGACCACCTTTCTTATTCACGAGAAATTGAACTGTATGACCCCTCTTTACACCATTGAAGAGAATGTCTACCACTCTACGCACCCATTCTGCGACCATTGCCGATGTGCAGGCTGGAGCGGCCATTTTGTATCGAAGAGAAGGTACCATTTTATAATCCCCGACGATAATAAACCGTTGACTGAAGGTTTTCTTGATAATCAGAGTCATCTGTTGCATGGAATAATTCACTGTAATGGGTACGGCCATTTGCTCTGTGTTAATGGCATTGAAGGGGGTTCTAAATTTCTCAGTGGCAGAGAAATCATGGATTTGTGGGACAGGATCTGTACAACTCTTCGAACAAGGAAAATCGCAGTTGAAGATACATCAAAGAAGCGCCTGATGGATCTTCGCCTACTTCATGGAGTTGCTTATGGCCATTCTTGGTTTGGTAGGTGGGGTTACAGATTTTGTCGTGGAAGCTTTGGTGTGAAAGAGCAAAACTATGATGCAGCGATCGAACTTCTAAGTTCGTTAGAGCTTGATGAGGTCGTTCAATGTTTTAGTAATACAATTCGCCATAAAGAAATCAAACAAATAATTCGCCACTATAGAGACATGAGCGAAACCCAGTTGATTACAATCAAGGATCTTCTCAGGTTTATGCTTACCGTCAAGTCTCGGGCACCTCCTCCGCCTAAGAGACTAGTTTTCAATATCACTGTTCCTCCTCCTTCAAACTTCTGCTCAAAAAACTCGACGAGATTTTCAATGTCAAGCAAGCATAACCCGTTAAAGGAAAAATCTGTCAGGTACAAAAAGTTCAGTTCTGCAGTGGCTAATATGGACAGTAGGTGGCCTACAAGGCGACTAGAATACGCAGCCCAAGTGATAGTAGATGCATTGAAAGAAAACAAAGCAAACAGTTCAGGTTCTGGTGGGATGACGAGGCAGGATGTTAGAGATGCAGCTAGGCTCCACATTGGTGACACAGGCTTGCTGGATTATGTGCTGAAATCACTGAATAATATGATTGTTGGAAACTACGTTGTTCGTCGAATGGTCAACCCGACAACTCGAATCCTAGAGTACAGCATTCATGAGCTGGGAAATGGATCTAAAGCCCCCGAACTACATCGCGAGCTAAAGGTTTTTAATCATATGGAGCCTCCAGCAGAATCAGAACAAGTGCCAGGAATTGATGTTTACAGTGACGTAGCTTTTTTCTACAAGAATGTCCTACTGGGTTACCCAGATTCAGAACAAGTGGACTTGGCGATTCAAACAATTCTAGACAGCAGGCATTTTGTGAAGGAATGGTCATTATTCGATGAAATCGAGCAAGTTTTGACTTTCATATGCCGCTTGATACCCAACTTTGTTGATGATAAACGAGAGTTGAACAAGGAAGTATCCCCAGGTGAGATTGTGCTGGTTCCACTGCATGCAACTGTTGGAGACTTGAAGCAAGCAGCTGAGACTGCTCTAAGGGATATATGTATTGCAGAGAGAGTCATGGTGATAGAGATTGCAGAGTTAGTGGGAATCAGTGATGAGGAAGTGCTTTTTGGGGTAGTGGAGTCTGGTGTGGATCTGCGCGTGAGGGGCATTGGCTTAGATTTGGTTACTCCATTGAAGTATCAGGGAGGTGCAGACAATTGGAAGGTGACATGTGAATGTGGAGCTCAGGATGATGATGGGGAGAGAATGGTGGCATGTGACATTTGTGAGGTGTGGCAGCACACAAGGTGCTGTGGGATTGATGACTCAGAGACGGTGCCACCATTGTTTGTGTGCTCTGGGTGTTGTGATTCACTTGTACCTCCAAGGGTTGATTCTGCATTTAGCAACGATAGCATGGACTGTGCTGATGATTTTTTGATTTCGTCAGAGCCTAATAACTTTCTGGAATTTGGGTATGGCTACTGA 2094 0.4441 MSFSLLEACRKRKRWPKVFRFHSFADPGCPINPNGPFRDNIRLFLQECGELEDFEIQGMPLWTTFLIHEKLNCMTPLYTIEENVYHSTHPFCDHCRCAGWSGHFVSKRRYHFIIPDDNKPLTEGFLDNQSHLLHGIIHCNGYGHLLCVNGIEGGSKFLSGREIMDLWDRICTTLRTRKIAVEDTSKKRLMDLRLLHGVAYGHSWFGRWGYRFCRGSFGVKEQNYDAAIELLSSLELDEVVQCFSNTIRHKEIKQIIRHYRDMSETQLITIKDLLRFMLTVKSRAPPPPKRLVFNITVPPPSNFCSKNSTRFSMSSKHNPLKEKSVRYKKFSSAVANMDSRWPTRRLEYAAQVIVDALKENKANSSGSGGMTRQDVRDAARLHIGDTGLLDYVLKSLNNMIVGNYVVRRMVNPTTRILEYSIHELGNGSKAPELHRELKVFNHMEPPAESEQVPGIDVYSDVAFFYKNVLLGYPDSEQVDLAIQTILDSRHFVKEWSLFDEIEQVLTFICRLIPNFVDDKRELNKEVSPGEIVLVPLHATVGDLKQAAETALRDTXCIAERVMVIEIAELVGISDEEVLFGVVESGVDLRVRGIGLDLVTPLKYQGGADNWKVTCECGAQDDDGERMVACDICEVWQHTRCCGIDDSETVPPLFVCSGCCDSLVPPRVDSAFSNDSMDCADDFLISSEPNNFLEFGYGY 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0628 698 SMART PHD_3 613 659 IPR001965 -
Prci8g0628 698 CDD PHD_MMD1_like 614 658 - -
Prci8g0628 698 SUPERFAMILY FYVE/PHD zinc finger 606 664 IPR011011 -
Prci8g0628 698 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 12 666 - -
Prci8g0628 698 ProSitePatterns Zinc finger PHD-type signature. 614 658 IPR019786 -
Prci8g0628 698 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 601 662 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0628 Prci-Chr8 4113124 4115751 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0628 10 664 PHD Transcription Factor Family AT5G22260 34.222 8.80e-120 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0628 K26271 - qsa:O6P43_014263 996.882