Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0627 ATGGCCCAACGTAGGGTGCACAAGCCTAGGTGGCTCGAGCCTATTCTGAAAAAAACTTTCTTTGATTCTTGTGTGGCTCATCCTATGCATAAGAATGAACGGAATAAATACTGTATGACCTGCAACAAGTCTGCTTGCCAATACTGTGTGTCTCATGGCATCCATCGATGCCACAAAATGCTGAGCATTTTCAAACATGTCTACAAATATGTTGTCGCTTTAGCTGCTGTTGAAAAGCATATTGACTGTTCACACATTCAGACCTACACATGCAACAAGAGATTGGTTATTGCTCTGAATCCTCTTCCACATGGCAGTTTGGAGTCAAATACTGATCTGTCATGTGAGACCTGTGGCAGAAGGCTGAATGACCCTCGTTTGTATCGTTATTGCTCCATTTCATGCAAGGTTAAAGCTGTTTTAAGGAAGCCCGATGATTCACTTCCTCCCTTCATTACCAAGCAGCGTCCTTCTAAGGGAAAGAAAGAGAAGGCCTCTGTGCTCCGGAAGCCAATAAACAAAAGAAAGGGAACACCCCGCAGGGCTCCCTTCTTCTGA 558 0.4444 MAQRRVHKPRWLEPILKKTFFDSCVAHPMHKNERNKYCMTCNKSACQYCVSHGIHRCHKMLSIFKHVYKYVVALAAVEKHIDCSHIQTYTCNKRLVIALNPLPHGSLESNTDLSCETCGRRLNDPRLYRYCSISCKVKAVLRKPDDSLPPFITKQRPSKGKKEKASVLRKPINKRKGTPRRAPFF 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0627 185 Pfam PLATZ transcription factor 65 137 IPR006734 -
Prci8g0627 185 SUPERFAMILY B-box zinc-binding domain 29 74 - -
Prci8g0627 185 CDD Bbox2 24 63 - -
Prci8g0627 185 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 4 152 - -
Prci8g0627 185 MobiDBLite consensus disorder prediction 148 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0627 Prci-Chr8 4108912 4113113 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Prci8g0627 PLATZ 3.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0627 - - qsa:O6P43_014262 245.358