Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0625 ATGGTTGAACAAATGGCCCAACGTAGGGTGCACAAGCCTAGGTGGCTCGAGCCTATTCTGAAAAAAACTTTCTTTGATTCTTGTGTGGCTCATCCTATGCATAAGAATGAACGGAATAAATACTGTATGACCTGCAACAAGTCTGCTTGCCAATACTGTGTGTCTCATGGCATCCATCGATGCCACAAAATGCTGAGCATTTTCAAACATGTCTACAAATATGTTGTCGCTTTAGCTGCTGTTGAAAAGCATATTGACTGTTCACACATTCAGACCTACACATGCAACAAGAGATTGGTTATTGCTCTGAATCCTCTTCCACATGGCAGTTTGGAGTCAAATACTGATCTGTCATGTGAGACCTGTGGCAGAAGGCTGAATGACCCTCGTTTGTATCGTTATTGCTCCATTTCATGCAAGGTTAAAGCTGTTTTAAGGAAGCCCGATGATTCACTTCCTCCCTTCATTACCAAGCAGCGTCCTTCTAAGGGAAAGAAAGAGAAGGCCTCTGTGCTCCGGAAGCCAATAAACAAAAGAAAGGGAACACCCCGCAGGGCTCCCTTCTTCTGA 570 0.4421 MVEQMAQRRVHKPRWLEPILKKTFFDSCVAHPMHKNERNKYCMTCNKSACQYCVSHGIHRCHKMLSIFKHVYKYVVALAAVEKHIDCSHIQTYTCNKRLVIALNPLPHGSLESNTDLSCETCGRRLNDPRLYRYCSISCKVKAVLRKPDDSLPPFITKQRPSKGKKEKASVLRKPINKRKGTPRRAPFF 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0625 189 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 6 156 - -
Prci8g0625 189 Pfam PLATZ transcription factor 69 141 IPR006734 -
Prci8g0625 189 SUPERFAMILY B-box zinc-binding domain 33 78 - -
Prci8g0625 189 CDD Bbox2 28 67 - -
Prci8g0625 189 MobiDBLite consensus disorder prediction 152 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0625 Prci-Chr8 4108912 4113117 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Prci8g0625 PLATZ 3.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0625 - - qsa:O6P43_014262 249.21